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Protein

Yop proteins translocation protein H

Gene

yscH

Organism
Yersinia pestis
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Belongs to an operon involved in the translocation of Yop proteins across the bacterial membranes or in the specific control of this function.

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Virulence

Enzyme and pathway databases

BioCyciYPES214092:GKDD-4264-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Yop proteins translocation protein H
Alternative name(s):
Low calcium response locus protein P
Gene namesi
Name:yscH
Synonyms:lcrP
Ordered Locus Names:YPCD1.57, y5021, y0024, YP_pCD26
Encoded oniPlasmid pCD10 Publication
OrganismiYersinia pestis
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
Proteomesi
  • UP000000815 Componenti: Plasmid pCD1
  • UP000001019 Componenti: Plasmid pCD1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 165165Yop proteins translocation protein HPRO_0000066484Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiP68590. 6 interactions.

Structurei

Secondary structure

1
165
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi43 – 5614Combined sources
Helixi62 – 8019Combined sources
Helixi89 – 10315Combined sources
Helixi108 – 11912Combined sources
Helixi131 – 14414Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1Z21X-ray1.50A38-149[»]
ProteinModelPortaliP68590.
SMRiP68590. Positions 42-145.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP68590.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000219619.
KOiK04052.
OMAiMILLPYN.

Family and domain databases

InterProiIPR013349. T3SS_YopR.
[Graphical view]
PfamiPF09025. T3SS_needle_reg. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02509. type_III_yopR. 1 hit.

Sequencei

Sequence statusi: Complete.

P68590-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVTLNRGSI TSLMSSSQAV STLQPVASEL KTQLENKLKS ESAEKTREVL
60 70 80 90 100
WQQYYASNPP DHAVLEVLAT PVREALLARF GQHQGSVVPA IDLPELRSVL
110 120 130 140 150
QQFDSFGKRW EAILLQVLEG IKPNESQVGL PYLSELINKE LMILLPSNSI
160
VDSLLHNSHQ IDMDT
Length:165
Mass (Da):18,348
Last modified:December 7, 2004 - v1
Checksum:iB0DCD99C52B95905
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF074612 Genomic DNA. Translation: AAC69828.1.
AF053946 Genomic DNA. Translation: AAC62547.1.
AL117189 Genomic DNA. Translation: CAB54934.1.
AE017043 Genomic DNA. Translation: AAS58545.1.
PIRiT43568.
RefSeqiNP_395191.1. NC_003131.1.
NP_857725.1. NC_004836.1.
NP_857920.1. NC_004839.1.
WP_002212915.1. NZ_LIXY01000017.1.

Genome annotation databases

EnsemblBacteriaiAAS58545; AAS58545; YP_pCD26.
GeneIDi1149284.
15151866.
KEGGipg:1149284.
pg:15151866.
ype:YPCD1.57.
ypm:YP_pCD26.
PATRICi18588644. VBIYerPes7843_0067.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF074612 Genomic DNA. Translation: AAC69828.1.
AF053946 Genomic DNA. Translation: AAC62547.1.
AL117189 Genomic DNA. Translation: CAB54934.1.
AE017043 Genomic DNA. Translation: AAS58545.1.
PIRiT43568.
RefSeqiNP_395191.1. NC_003131.1.
NP_857725.1. NC_004836.1.
NP_857920.1. NC_004839.1.
WP_002212915.1. NZ_LIXY01000017.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1Z21X-ray1.50A38-149[»]
ProteinModelPortaliP68590.
SMRiP68590. Positions 42-145.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP68590. 6 interactions.

Protocols and materials databases

DNASUi1149284.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS58545; AAS58545; YP_pCD26.
GeneIDi1149284.
15151866.
KEGGipg:1149284.
pg:15151866.
ype:YPCD1.57.
ypm:YP_pCD26.
PATRICi18588644. VBIYerPes7843_0067.

Phylogenomic databases

HOGENOMiHOG000219619.
KOiK04052.
OMAiMILLPYN.

Enzyme and pathway databases

BioCyciYPES214092:GKDD-4264-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP68590.

Family and domain databases

InterProiIPR013349. T3SS_YopR.
[Graphical view]
PfamiPF09025. T3SS_needle_reg. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02509. type_III_yopR. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYSCH_YERPE
AccessioniPrimary (citable) accession number: P68590
Secondary accession number(s): Q00929
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 7, 2004
Last sequence update: December 7, 2004
Last modified: September 7, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Plasmid, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.