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Protein

Protein F9

Gene

F9L

Organism
Vaccinia virus (strain Copenhagen) (VACV)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein F9
Gene namesi
ORF Names:F9L
OrganismiVaccinia virus (strain Copenhagen) (VACV)
Taxonomic identifieri10249 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stagePoxviridaeChordopoxvirinaeOrthopoxvirusVaccinia virus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000008269 Componenti: Genome

Subcellular locationi

  • Virion membrane Curated; Single-pass membrane protein Curated

  • Note: Component of the mature virion (MV) membrane. The mature virion is located in the cytoplasm of infected cells and is probably released by cell lysis (By similarity).By similarity

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 175Virion surfaceSequence analysisAdd BLAST175
Transmembranei176 – 196HelicalSequence analysisAdd BLAST21
Topological domaini197 – 212IntravirionSequence analysisAdd BLAST16

GO - Cellular componenti

Keywords - Cellular componenti

Membrane, Viral envelope protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000994911 – 212Protein F9Add BLAST212

Keywords - PTMi

Disulfide bond

Interactioni

Subunit structurei

Interacts with G4; this interaction involves formation of a transient disulfide-bonded intermediate, allowing disulfide bond transfer.By similarity

Structurei

3D structure databases

ProteinModelPortaliP68452.
SMRiP68452.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the chordopoxvirinae L1 protein family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

OrthoDBiVOG090000TN.

Family and domain databases

InterProiView protein in InterPro
IPR003472. Virion_mem_poxvirus_L1.
PfamiView protein in Pfam
PF02442. L1R_F9L. 1 hit.

Sequencei

Sequence statusi: Complete.

P68452-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAETKEFKTL YNLFIDSYLQ KLAQHSIPTN VTCAIHIGEV IGQFKNCALR
60 70 80 90 100
ITNKCMSNSR LSFTLMVESF IEVISLLPEK DRRAIAEEIG IDLDDVPSAV
110 120 130 140 150
SKLEKNCNAY AEVNNIIDIQ KLDIGECSAP PGQHMLLQIV NTGSAEANCG
160 170 180 190 200
LQTIVKSLNK IYVPPIIENR LPYYDPWFLV GVAIILVIFT VAICSIRRNL
210
ALKYRYGTFL YV
Length:212
Mass (Da):23,792
Last modified:November 23, 2004 - v1
Checksum:i5C99777A4CFADD9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M35027 Genomic DNA. Translation: AAA48025.1.
PIRiE42507.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M35027 Genomic DNA. Translation: AAA48025.1.
PIRiE42507.

3D structure databases

ProteinModelPortaliP68452.
SMRiP68452.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

OrthoDBiVOG090000TN.

Family and domain databases

InterProiView protein in InterPro
IPR003472. Virion_mem_poxvirus_L1.
PfamiView protein in Pfam
PF02442. L1R_F9L. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiF9_VACCC
AccessioniPrimary (citable) accession number: P68452
Secondary accession number(s): P21018
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 23, 2004
Last sequence update: November 23, 2004
Last modified: March 15, 2017
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.