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Protein

Dof zinc finger protein DOF1.5

Gene

DOF1.5

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Acts as a negative regulator in the phytochrome-mediated light responses. Controls phyB-mediated end-of-day response and the phyA-mediated anthocyanin accumulation. Not involved in direct flowering time regulation.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri62 – 116Dof-typePROSITE-ProRule annotationAdd BLAST55

GO - Molecular functioni

  • DNA binding transcription factor activity Source: TAIR
  • metal ion binding Source: UniProtKB-KW
  • transcription regulatory region DNA binding Source: TAIR

GO - Biological processi

  • regulation of transcription, DNA-templated Source: TAIR
  • seed coat development Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Dof zinc finger protein DOF1.5
Short name:
AtDOF1.5
Gene namesi
Name:DOF1.5
Synonyms:COG1
Ordered Locus Names:At1g29160
ORF Names:F28N24.35
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G29160
TAIRilocus:2030006 AT1G29160

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000742671 – 175Dof zinc finger protein DOF1.5Add BLAST175

Proteomic databases

PaxDbiP68350
PRIDEiP68350

Expressioni

Inductioni

By red or far-red light. Circadian-regulation. The transcript level rises progressively from dawn and decreases during the night.1 Publication

Gene expression databases

ExpressionAtlasiP68350 baseline and differential
GenevisibleiP68350 AT

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
At3g11100Q8VZI93EBI-15205840,EBI-1998580

Protein-protein interaction databases

IntActiP68350, 7 interactors
STRINGi3702.AT1G29160.1

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi162 – 168Nuclear localization signalSequence analysis7

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri62 – 116Dof-typePROSITE-ProRule annotationAdd BLAST55

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiENOG410IYTF Eukaryota
ENOG4111564 LUCA
HOGENOMiHOG000090574
InParanoidiP68350
OMAiLEEWHLA
OrthoDBiEOG09360PYQ
PhylomeDBiP68350

Family and domain databases

InterProiView protein in InterPro
IPR003851 Znf_Dof
PfamiView protein in Pfam
PF02701 zf-Dof, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD007478 Znf_Dof, 1 hit
PROSITEiView protein in PROSITE
PS01361 ZF_DOF_1, 1 hit
PS50884 ZF_DOF_2, 1 hit

Sequencei

Sequence statusi: Complete.

P68350-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATQDSQGIK LFGKTITFNA NITQTIKKEE QQQQQQPELQ ATTAVRSPSS
60 70 80 90 100
DLTAEKRPDK IIPCPRCKSM ETKFCYFNNY NVNQPRHFCK GCQRYWTAGG
110 120 130 140 150
ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA
160 170
TASHGGFRHD FPVKRLRCYT DGQSC
Length:175
Mass (Da):19,423
Last modified:November 9, 2004 - v1
Checksum:iBFF644D70332137E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC021043 Genomic DNA No translation available.
CP002684 Genomic DNA Translation: AEE31051.1
BT029990 mRNA Translation: ABN04728.1
RefSeqiNP_174211.1, NM_102657.2
UniGeneiAt.64845

Genome annotation databases

EnsemblPlantsiAT1G29160.1; AT1G29160.1; AT1G29160
GeneIDi839790
GrameneiAT1G29160.1; AT1G29160.1; AT1G29160
KEGGiath:AT1G29160

Similar proteinsi

Entry informationi

Entry nameiDOF15_ARATH
AccessioniPrimary (citable) accession number: P68350
Secondary accession number(s): A2RVJ9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 9, 2004
Last sequence update: November 9, 2004
Last modified: May 23, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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