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Protein

HTH-type transcriptional repressor NanR

Gene

nanR

Organism
Salmonella typhi
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Transcriptional repressor that controls expression of the genes required for the catabolism of sialic acids.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi58 – 77H-T-H motifUniRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding, Repressor
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional repressor NanRUniRule annotation
Gene namesi
Name:nanRUniRule annotation
Ordered Locus Names:STY3521, t3257
OrganismiSalmonella typhi
Taxonomic identifieri90370 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000002670 Componenti: Chromosome
  • UP000000541 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000506581 – 263HTH-type transcriptional repressor NanRAdd BLAST263

Interactioni

Protein-protein interaction databases

STRINGi220341.STY3521

Structurei

3D structure databases

ProteinModelPortaliP67736
SMRiP67736
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 98HTH gntR-typeUniRule annotationAdd BLAST69

Sequence similaritiesi

Belongs to the NanR family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108QBF Bacteria
COG2186 LUCA
HOGENOMiHOG000273991
KOiK22104
OMAiMLIWTGK

Family and domain databases

CDDicd07377 WHTH_GntR, 1 hit
Gene3Di1.10.10.10, 1 hit
1.20.120.530, 1 hit
HAMAPiMF_01236 HTH_NanR, 1 hit
InterProiView protein in InterPro
IPR011711 GntR_C
IPR008920 TF_FadR/GntR_C
IPR000524 Tscrpt_reg_HTH_GntR
IPR023730 Tscrpt_reg_NanR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF07729 FCD, 1 hit
PF00392 GntR, 1 hit
PRINTSiPR00035 HTHGNTR
SMARTiView protein in SMART
SM00895 FCD, 1 hit
SM00345 HTH_GNTR, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF48008 SSF48008, 1 hit
PROSITEiView protein in PROSITE
PS50949 HTH_GNTR, 1 hit

Sequencei

Sequence statusi: Complete.

P67736-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVMNAFDSQ AEDSPTSLGR SLRRRPLARK KLSEMVEEEL EQMIRRHEFG
60 70 80 90 100
EGEQLPSERE LMAFFNVGRP SVREALAALK RKGLVQINNG ERARVSRPSA
110 120 130 140 150
DTIISELSGM AKDFLTHPGG IAHFEQLRLF FESSLVRYAA EHATDEQIAL
160 170 180 190 200
LTKALEINSQ SLDDNALFIR SDVEFHRVLA EIPGNPIFMA IHVALLDWLI
210 220 230 240 250
AARPSVPDRE LHEHNNVSYQ QHIVIVDAIR QRDPDKADRA LQTHLNSVSA
260
TWHALGKKSQ KMR
Length:263
Mass (Da):29,803
Last modified:October 11, 2004 - v1
Checksum:iA41EC57978D122E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL513382 Genomic DNA Translation: CAD07857.1
AE014613 Genomic DNA Translation: AAO70792.1
RefSeqiNP_457718.1, NC_003198.1
WP_000382926.1, NZ_PHKG01000004.1

Genome annotation databases

EnsemblBacteriaiAAO70792; AAO70792; t3257
CAD07857; CAD07857; CAD07857
GeneIDi1249775
KEGGistt:t3257
sty:STY3521
PATRICifig|220341.7.peg.3584

Similar proteinsi

Entry informationi

Entry nameiNANR_SALTI
AccessioniPrimary (citable) accession number: P67736
Secondary accession number(s): Q8XFH8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: March 28, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome
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Main funding by: National Institutes of Health