P67244 (YQHA_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0114 protein YqhA

Gene names

Name:	yqhA
Ordered Locus Names:	b3002, JW2971

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	164 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Potential HAMAP-Rule MF_00143.
Sequence similarities	Belongs to the UPF0114 family.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 164	164	UPF0114 protein YqhA HAMAP-Rule MF_00143		PRO_0000214367
Regions
	Transmembrane	15 – 35	21	Helical; Potential
	Transmembrane	53 – 73	21	Helical; Potential
	Transmembrane	136 – 156	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	P67244 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: 61FC04B730394DF4	FASTA	164	18,641
	10 20 30 40 50 60 MERFLENAMY ASRWLLAPVY FGLSLALVAL ALKFFQEIIH VLPNIFSMAE SDLILVLLSL 70 80 90 100 110 120 VDMTLVGGLL VMVMFSGYEN FVSQLDISEN KEKLNWLGKM DATSLKNKVA ASIVAISSIH 130 140 150 160 LLRVFMDAKN VPDNKLMWYV IIHLTFVLSA FVMGYLDRLT RHNH

References

[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U28377 Genomic DNA. Translation: AAA69169.1. U00096 Genomic DNA. Translation: AAC76038.1. AP009048 Genomic DNA. Translation: BAE77061.1.
PIR	H65086.
RefSeq	NP_417475.1. NC_000913.2. YP_491197.1. NC_007779.1.
3D structure databases
ProteinModelPortal	P67244.
ModBase	Search...
Protein-protein interaction databases
STRING	511145.b3002.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC76038; AAC76038; b3002. BAE77061; BAE77061; BAE77061.
GeneID	12932421. 947479.
KEGG	ecj:Y75_p2931. eco:b3002.
PATRIC	32121422. VBIEscCol129921_3098.
Organism-specific databases
EchoBASE	EB2832.
EcoGene	EG13011. yqhA.
Phylogenomic databases
eggNOG	COG2862.
HOGENOM	HOG000262358.
OMA	LIFASRW.
ProtClustDB	PRK05208.
Enzyme and pathway databases
BioCyc	EcoCyc:G7559-MONOMER. ECOL316407:JW2971-MONOMER.
Gene expression databases
Genevestigator	P67244.
Family and domain databases
HAMAP	MF_00143. UPF0114.
InterPro	IPR005134. UPF0114. IPR020761. UPF0114_bac. IPR020765. UPF0114_gbac. [Graphical view]
Pfam	PF03350. UPF0114. 1 hit. [Graphical view]
TIGRFAMs	TIGR00645. HI0507. 1 hit.
ProtoNet	Search...

Entry information

Entry name

YQHA_ECOLI

Accession

Primary (citable) accession number: P67244
Secondary accession number(s): P52082, Q2M9J5

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 11, 2004
Last sequence update:	October 11, 2004
Last modified:	May 1, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program