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P67244 (YQHA_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
UPF0114 protein YqhA
Gene names
Name:yqhA
Ordered Locus Names:b3002, JW2971
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length164 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential HAMAP-Rule MF_00143.

Sequence similarities

Belongs to the UPF0114 family.

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 164164UPF0114 protein YqhA HAMAP-Rule MF_00143
PRO_0000214367

Regions

Transmembrane15 – 3521Helical; Potential
Transmembrane53 – 7321Helical; Potential
Transmembrane136 – 15621Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P67244 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 61FC04B730394DF4

FASTA16418,641
        10         20         30         40         50         60 
MERFLENAMY ASRWLLAPVY FGLSLALVAL ALKFFQEIIH VLPNIFSMAE SDLILVLLSL 

        70         80         90        100        110        120 
VDMTLVGGLL VMVMFSGYEN FVSQLDISEN KEKLNWLGKM DATSLKNKVA ASIVAISSIH 

       130        140        150        160 
LLRVFMDAKN VPDNKLMWYV IIHLTFVLSA FVMGYLDRLT RHNH 

« Hide

References

[1]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U28377 Genomic DNA. Translation: AAA69169.1.
U00096 Genomic DNA. Translation: AAC76038.1.
AP009048 Genomic DNA. Translation: BAE77061.1.
PIRH65086.
RefSeqNP_417475.1. NC_000913.3.
YP_491197.1. NC_007779.1.

3D structure databases

ProteinModelPortalP67244.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING511145.b3002.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC76038; AAC76038; b3002.
BAE77061; BAE77061; BAE77061.
GeneID12932421.
947479.
KEGGecj:Y75_p2931.
eco:b3002.
PATRIC32121422. VBIEscCol129921_3098.

Organism-specific databases

EchoBASEEB2832.
EcoGeneEG13011. yqhA.

Phylogenomic databases

eggNOGCOG2862.
HOGENOMHOG000262358.
OMALIFASRW.
OrthoDBEOG6VHZH0.
PhylomeDBP67244.
ProtClustDBPRK05208.

Enzyme and pathway databases

BioCycEcoCyc:G7559-MONOMER.
ECOL316407:JW2971-MONOMER.

Gene expression databases

GenevestigatorP67244.

Family and domain databases

HAMAPMF_00143. UPF0114.
InterProIPR005134. UPF0114.
IPR020761. UPF0114_bac.
IPR020765. UPF0114_gbac.
[Graphical view]
PfamPF03350. UPF0114. 1 hit.
[Graphical view]
TIGRFAMsTIGR00645. HI0507. 1 hit.
ProtoNetSearch...

Other

PROP67244.

Entry information

Entry nameYQHA_ECOLI
AccessionPrimary (citable) accession number: P67244
Secondary accession number(s): P52082, Q2M9J5
Entry history
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: April 16, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene