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P67244

- YQHA_ECOLI

UniProt

P67244 - YQHA_ECOLI

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Protein

UPF0114 protein YqhA

Gene

yqhA

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7559-MONOMER.
ECOL316407:JW2971-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0114 protein YqhA
Gene namesi
Name:yqhA
Ordered Locus Names:b3002, JW2971
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG13011. yqhA.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei15 – 3521HelicalSequence AnalysisAdd
BLAST
Transmembranei53 – 7321HelicalSequence AnalysisAdd
BLAST
Transmembranei136 – 15621HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 164164UPF0114 protein YqhAPRO_0000214367Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP67244.

Interactioni

Protein-protein interaction databases

STRINGi511145.b3002.

Structurei

3D structure databases

ProteinModelPortaliP67244.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0114 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG2862.
HOGENOMiHOG000262358.
InParanoidiP67244.
OMAiIKFFQEV.
OrthoDBiEOG6VHZH0.
PhylomeDBiP67244.

Family and domain databases

HAMAPiMF_00143. UPF0114.
InterProiIPR005134. UPF0114.
IPR020761. UPF0114_bac.
IPR020765. UPF0114_gbac.
[Graphical view]
PfamiPF03350. UPF0114. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00645. HI0507. 1 hit.

Sequencei

Sequence statusi: Complete.

P67244-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MERFLENAMY ASRWLLAPVY FGLSLALVAL ALKFFQEIIH VLPNIFSMAE
60 70 80 90 100
SDLILVLLSL VDMTLVGGLL VMVMFSGYEN FVSQLDISEN KEKLNWLGKM
110 120 130 140 150
DATSLKNKVA ASIVAISSIH LLRVFMDAKN VPDNKLMWYV IIHLTFVLSA
160
FVMGYLDRLT RHNH
Length:164
Mass (Da):18,641
Last modified:October 11, 2004 - v1
Checksum:i61FC04B730394DF4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69169.1.
U00096 Genomic DNA. Translation: AAC76038.1.
AP009048 Genomic DNA. Translation: BAE77061.1.
PIRiH65086.
RefSeqiNP_417475.1. NC_000913.3.
YP_491197.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC76038; AAC76038; b3002.
BAE77061; BAE77061; BAE77061.
GeneIDi12932421.
947479.
KEGGiecj:Y75_p2931.
eco:b3002.
PATRICi32121422. VBIEscCol129921_3098.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69169.1 .
U00096 Genomic DNA. Translation: AAC76038.1 .
AP009048 Genomic DNA. Translation: BAE77061.1 .
PIRi H65086.
RefSeqi NP_417475.1. NC_000913.3.
YP_491197.1. NC_007779.1.

3D structure databases

ProteinModelPortali P67244.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 511145.b3002.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC76038 ; AAC76038 ; b3002 .
BAE77061 ; BAE77061 ; BAE77061 .
GeneIDi 12932421.
947479.
KEGGi ecj:Y75_p2931.
eco:b3002.
PATRICi 32121422. VBIEscCol129921_3098.

Organism-specific databases

EchoBASEi EB2832.
EcoGenei EG13011. yqhA.

Phylogenomic databases

eggNOGi COG2862.
HOGENOMi HOG000262358.
InParanoidi P67244.
OMAi IKFFQEV.
OrthoDBi EOG6VHZH0.
PhylomeDBi P67244.

Enzyme and pathway databases

BioCyci EcoCyc:G7559-MONOMER.
ECOL316407:JW2971-MONOMER.

Miscellaneous databases

PROi P67244.

Gene expression databases

Genevestigatori P67244.

Family and domain databases

HAMAPi MF_00143. UPF0114.
InterProi IPR005134. UPF0114.
IPR020761. UPF0114_bac.
IPR020765. UPF0114_gbac.
[Graphical view ]
Pfami PF03350. UPF0114. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00645. HI0507. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYQHA_ECOLI
AccessioniPrimary (citable) accession number: P67244
Secondary accession number(s): P52082, Q2M9J5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: October 29, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3