Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

UPF0102 protein BR0178/BS1330_I0178

Gene

BR0178

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. nuclease activity Source: InterPro
  2. nucleic acid binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0102 protein BR0178/BS1330_I0178UniRule annotation
Gene namesi
Ordered Locus Names:BR0178, BS1330_I0178
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000007104 Componenti: Chromosome I UP000000824 Componenti: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 126126UPF0102 protein BR0178/BS1330_I0178PRO_0000167337Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi204722.BR0178.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0102 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0792.
HOGENOMiHOG000016277.
KOiK07460.
OMAiDIWLARQ.
OrthoDBiEOG6W19MF.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
HAMAPiMF_00048. UPF0102.
InterProiIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamiPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMiSSF52980. SSF52980. 1 hit.

Sequencei

Sequence statusi: Complete.

P67229-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDLREKKRI AFFRGHSAER LAAFALMLKG FRIVARRYRT RLGEIDLIAR
60 70 80 90 100
RGDLVLIVEV KARASFEAAQ FAVTPQAMRR IEAAADLWLQ RQTDRARLSL
110 120
RFDMVAVLPR RWPKHVPAFF TAGHYG
Length:126
Mass (Da):14,582
Last modified:October 11, 2004 - v1
Checksum:i43D1E099A072F796
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN29131.1.
CP002997 Genomic DNA. Translation: AEM17543.1.
RefSeqiNP_697216.1. NC_004310.3.
YP_005615035.1. NC_017251.1.

Genome annotation databases

EnsemblBacteriaiAAN29131; AAN29131; BR0178.
AEM17543; AEM17543; BS1330_I0178.
KEGGibms:BR0178.
bsi:BS1330_I0178.
PATRICi17788626. VBIBruSui107850_0186.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN29131.1.
CP002997 Genomic DNA. Translation: AEM17543.1.
RefSeqiNP_697216.1. NC_004310.3.
YP_005615035.1. NC_017251.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi204722.BR0178.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN29131; AAN29131; BR0178.
AEM17543; AEM17543; BS1330_I0178.
KEGGibms:BR0178.
bsi:BS1330_I0178.
PATRICi17788626. VBIBruSui107850_0186.

Phylogenomic databases

eggNOGiCOG0792.
HOGENOMiHOG000016277.
KOiK07460.
OMAiDIWLARQ.
OrthoDBiEOG6W19MF.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
HAMAPiMF_00048. UPF0102.
InterProiIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamiPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMiSSF52980. SSF52980. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.

Entry informationi

Entry nameiY178_BRUSU
AccessioniPrimary (citable) accession number: P67229
Secondary accession number(s): G0KBF1, Q8G2Y1, Q8YEV8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: April 1, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.