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P67229 (Y178_BRUSU) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
UPF0102 protein BR0178/BS1330_I0178
Gene names
Ordered Locus Names:BR0178, BS1330_I0178
OrganismBrucella suis biovar 1 (strain 1330) [Complete proteome] [HAMAP]
Taxonomic identifier204722 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length126 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0102 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionnuclease activity

Inferred from electronic annotation. Source: InterPro

nucleic acid binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 126126UPF0102 protein BR0178/BS1330_I0178 HAMAP-Rule MF_00048
PRO_0000167337

Sequences

Sequence LengthMass (Da)Tools
P67229 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 43D1E099A072F796

FASTA12614,582
        10         20         30         40         50         60 
MTDLREKKRI AFFRGHSAER LAAFALMLKG FRIVARRYRT RLGEIDLIAR RGDLVLIVEV 

        70         80         90        100        110        120 
KARASFEAAQ FAVTPQAMRR IEAAADLWLQ RQTDRARLSL RFDMVAVLPR RWPKHVPAFF 


TAGHYG 

« Hide

References

[1]"The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts."
Paulsen I.T., Seshadri R., Nelson K.E., Eisen J.A., Heidelberg J.F., Read T.D., Dodson R.J., Umayam L.A., Brinkac L.M., Beanan M.J., Daugherty S.C., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Nelson W.C., Ayodeji B., Kraul M. expand/collapse author list , Shetty J., Malek J.A., Van Aken S.E., Riedmuller S., Tettelin H., Gill S.R., White O., Salzberg S.L., Hoover D.L., Lindler L.E., Halling S.M., Boyle S.M., Fraser C.M.
Proc. Natl. Acad. Sci. U.S.A. 99:13148-13153(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1330.
[2]"Revised genome sequence of Brucella suis 1330."
Tae H., Shallom S., Settlage R., Preston D., Adams L.G., Garner H.R.
J. Bacteriol. 193:6410-6410(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1330.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE014291 Genomic DNA. Translation: AAN29131.1.
CP002997 Genomic DNA. Translation: AEM17543.1.
RefSeqNP_697216.1. NC_004310.3.
YP_005615035.1. NC_017251.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING204722.BR0178.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAN29131; AAN29131; BR0178.
AEM17543; AEM17543; BS1330_I0178.
GeneID1165835.
12138719.
KEGGbms:BR0178.
bsi:BS1330_I0178.
PATRIC17788626. VBIBruSui107850_0186.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0792.
HOGENOMHOG000016277.
KOK07460.
OMAQRYDIVA.
OrthoDBEOG6W19MF.
ProtClustDBPRK12497.

Family and domain databases

Gene3D3.40.1350.10. 1 hit.
HAMAPMF_00048. UPF0102.
InterProIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMSSF52980. SSF52980. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY178_BRUSU
AccessionPrimary (citable) accession number: P67229
Secondary accession number(s): G0KBF1, Q8G2Y1, Q8YEV8
Entry history
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: April 16, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

Brucella suis

Brucella suis (strain 1330): entries and gene names