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Protein

UPF0073 inner membrane protein YqfA

Gene

yqfA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciEcoCyc:G7512-MONOMER

Protein family/group databases

TCDBi1.C.113.1.10 the hly iii (hly iii) family

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0073 inner membrane protein YqfA
Gene namesi
Name:yqfA
Ordered Locus Names:b2899, JW2867
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13077 yqfA

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 23CytoplasmicSequence analysisAdd BLAST23
Transmembranei24 – 44HelicalSequence analysisAdd BLAST21
Topological domaini45 – 53PeriplasmicSequence analysis9
Transmembranei54 – 74HelicalSequence analysisAdd BLAST21
Topological domaini75 – 90CytoplasmicSequence analysisAdd BLAST16
Transmembranei91 – 111HelicalSequence analysisAdd BLAST21
Topological domaini112 – 113PeriplasmicSequence analysis2
Transmembranei114 – 134HelicalSequence analysisAdd BLAST21
Topological domaini135 – 138CytoplasmicSequence analysis4
Transmembranei139 – 159HelicalSequence analysisAdd BLAST21
Topological domaini160 – 165PeriplasmicSequence analysis6
Transmembranei166 – 186HelicalSequence analysisAdd BLAST21
Topological domaini187 – 195CytoplasmicSequence analysis9
Transmembranei196 – 216HelicalSequence analysisAdd BLAST21
Topological domaini217 – 219PeriplasmicSequence analysis3

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001768981 – 219UPF0073 inner membrane protein YqfAAdd BLAST219

Proteomic databases

PaxDbiP67153
PRIDEiP67153

Interactioni

Protein-protein interaction databases

BioGridi4261705, 10 interactors
STRINGi316385.ECDH10B_3073

Structurei

3D structure databases

ProteinModelPortaliP67153
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0073 (Hly-III) family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108UT2 Bacteria
COG1272 LUCA
HOGENOMiHOG000039438
InParanoidiP67153
KOiK11068
OMAiHEFFHAA
PhylomeDBiP67153

Family and domain databases

InterProiView protein in InterPro
IPR004254 AdipoR/HlyIII-related
IPR005744 Hy-lIII
PANTHERiPTHR20855 PTHR20855, 1 hit
PfamiView protein in Pfam
PF03006 HlyIII, 1 hit
TIGRFAMsiTIGR01065 hlyIII, 1 hit

Sequencei

Sequence statusi: Complete.

P67153-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVQKPLIKQG YSLAEEIANS VSHGIGLVFG IVGLVLLLVQ AVDLNASATA
60 70 80 90 100
ITSYSLYGGS MILLFLASTL YHAIPHQRAK MWLKKFDHCA IYLLIAGTYT
110 120 130 140 150
PFLLVGLDSP LARGLMIVIW SLALLGILFK LTIAHRFKIL SLVTYLAMGW
160 170 180 190 200
LSLVVIYEMA VKLAAGSVTL LAVGGVVYSL GVIFYVCKRI PYNHAIWHGF
210
VLGGSVCHFL AIYLYIGQA
Length:219
Mass (Da):23,847
Last modified:October 11, 2004 - v1
Checksum:iF1D863D2D1A30DA0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28375 Genomic DNA Translation: AAA83080.1
U00096 Genomic DNA Translation: AAC75937.1
AP009048 Genomic DNA Translation: BAE76964.1
PIRiC65074
RefSeqiNP_417375.1, NC_000913.3
WP_000250274.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75937; AAC75937; b2899
BAE76964; BAE76964; BAE76964
GeneIDi947381
KEGGiecj:JW2867
eco:b2899
PATRICifig|1411691.4.peg.3833

Similar proteinsi

Entry informationi

Entry nameiYQFA_ECOLI
AccessioniPrimary (citable) accession number: P67153
Secondary accession number(s): Q2M9U2, Q46827
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: March 28, 2018
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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