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P66858

- SSRP_BRUME

UniProt

P66858 - SSRP_BRUME

Protein

SsrA-binding protein

Gene

smpB

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (11 Oct 2004)
      Previous versions | rss
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    Functioni

    Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes.UniRule annotation

    GO - Molecular functioni

    1. RNA binding Source: UniProtKB-KW

    Keywords - Ligandi

    RNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    SsrA-binding proteinUniRule annotation
    Gene namesi
    Name:smpBUniRule annotation
    Ordered Locus Names:BMEI1300
    OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
    Taxonomic identifieri224914 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000000419: Chromosome I

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 158158SsrA-binding proteinPRO_0000102918Add
    BLAST

    Proteomic databases

    PRIDEiP66858.

    Interactioni

    Protein-protein interaction databases

    STRINGi224914.BMEI1300.

    Structurei

    3D structure databases

    ProteinModelPortaliP66858.
    SMRiP66858. Positions 11-132.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the SmpB family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000009628.
    KOiK03664.
    OMAiQWIPLEN.
    OrthoDBiEOG6HXJ9P.

    Family and domain databases

    Gene3Di2.40.280.10. 1 hit.
    HAMAPiMF_00023. SmpB.
    InterProiIPR023620. SmpB.
    IPR000037. SsrA-bd_prot.
    IPR020081. SsrA-bd_prot_CS.
    [Graphical view]
    PfamiPF01668. SmpB. 1 hit.
    [Graphical view]
    ProDomiPD004488. SmpB. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF74982. SSF74982. 1 hit.
    TIGRFAMsiTIGR00086. smpB. 1 hit.
    PROSITEiPS01317. SSRP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P66858-1 [UniParc]FASTAAdd to Basket

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    MNKPKNSPAR KMIAENRKAR FNFEILDTLE AGLVLTGTEV KSLRANQANI    50
    AESYASFEDG EFWLINSYIP EYTQGNRFNH EPRRLRKLLV SRREMSRLFN 100
    SVSREGMTVV PLKLYFNDRG RAKLELALAR GKKTHDKRET EKKRDWNREK 150
    ARLLRDRG 158
    Length:158
    Mass (Da):18,570
    Last modified:October 11, 2004 - v1
    Checksum:iF034DAD1DDD08D6E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE008917 Genomic DNA. Translation: AAL52481.1.
    PIRiAF3414.
    RefSeqiNP_540217.1. NC_003317.1.

    Genome annotation databases

    EnsemblBacteriaiAAL52481; AAL52481; BMEI1300.
    GeneIDi1197011.
    KEGGibme:BMEI1300.
    PATRICi17797365. VBIBruMel146950_0501.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE008917 Genomic DNA. Translation: AAL52481.1 .
    PIRi AF3414.
    RefSeqi NP_540217.1. NC_003317.1.

    3D structure databases

    ProteinModelPortali P66858.
    SMRi P66858. Positions 11-132.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224914.BMEI1300.

    Proteomic databases

    PRIDEi P66858.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAL52481 ; AAL52481 ; BMEI1300 .
    GeneIDi 1197011.
    KEGGi bme:BMEI1300.
    PATRICi 17797365. VBIBruMel146950_0501.

    Phylogenomic databases

    HOGENOMi HOG000009628.
    KOi K03664.
    OMAi QWIPLEN.
    OrthoDBi EOG6HXJ9P.

    Family and domain databases

    Gene3Di 2.40.280.10. 1 hit.
    HAMAPi MF_00023. SmpB.
    InterProi IPR023620. SmpB.
    IPR000037. SsrA-bd_prot.
    IPR020081. SsrA-bd_prot_CS.
    [Graphical view ]
    Pfami PF01668. SmpB. 1 hit.
    [Graphical view ]
    ProDomi PD004488. SmpB. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF74982. SSF74982. 1 hit.
    TIGRFAMsi TIGR00086. smpB. 1 hit.
    PROSITEi PS01317. SSRP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 16M / ATCC 23456 / NCTC 10094.

    Entry informationi

    Entry nameiSSRP_BRUME
    AccessioniPrimary (citable) accession number: P66858
    Secondary accession number(s): Q8YG61
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 11, 2004
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Brucella melitensis
      Brucella melitensis (strain 16M): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3