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P66858 (SSRP_BRUME) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
SsrA-binding protein
Gene names
Name:smpB
Ordered Locus Names:BMEI1300
OrganismBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) [Complete proteome] [HAMAP]
Taxonomic identifier224914 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length158 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes By similarity. HAMAP-Rule MF_00023

Subcellular location

Cytoplasm Potential HAMAP-Rule MF_00023.

Sequence similarities

Belongs to the SmpB family.

Ontologies

Keywords
   Cellular componentCytoplasm
   LigandRNA-binding
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 158158SsrA-binding protein HAMAP-Rule MF_00023
PRO_0000102918

Sequences

Sequence LengthMass (Da)Tools
P66858 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: F034DAD1DDD08D6E

FASTA15818,570
        10         20         30         40         50         60 
MNKPKNSPAR KMIAENRKAR FNFEILDTLE AGLVLTGTEV KSLRANQANI AESYASFEDG 

        70         80         90        100        110        120 
EFWLINSYIP EYTQGNRFNH EPRRLRKLLV SRREMSRLFN SVSREGMTVV PLKLYFNDRG 

       130        140        150 
RAKLELALAR GKKTHDKRET EKKRDWNREK ARLLRDRG 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE008917 Genomic DNA. Translation: AAL52481.1.
PIRAF3414.
RefSeqNP_540217.1. NC_003317.1.

3D structure databases

ProteinModelPortalP66858.
SMRP66858. Positions 11-132.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224914.BMEI1300.

Proteomic databases

PRIDEP66858.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL52481; AAL52481; BMEI1300.
GeneID1197011.
KEGGbme:BMEI1300.
PATRIC17797365. VBIBruMel146950_0501.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000009628.
KOK03664.
OMAQWIPLEN.
OrthoDBEOG6HXJ9P.

Family and domain databases

Gene3D2.40.280.10. 1 hit.
HAMAPMF_00023. SmpB.
InterProIPR023620. SmpB.
IPR000037. SsrA-bd_prot.
IPR020081. SsrA-bd_prot_CS.
[Graphical view]
PfamPF01668. SmpB. 1 hit.
[Graphical view]
ProDomPD004488. SmpB. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF74982. SSF74982. 1 hit.
TIGRFAMsTIGR00086. smpB. 1 hit.
PROSITEPS01317. SSRP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSSRP_BRUME
AccessionPrimary (citable) accession number: P66858
Secondary accession number(s): Q8YG61
Entry history
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Brucella melitensis

Brucella melitensis (strain 16M): entries and gene names