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P66858

- SSRP_BRUME

UniProt

P66858 - SSRP_BRUME

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Protein

SsrA-binding protein

Gene

smpB

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes.UniRule annotation

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
SsrA-binding proteinUniRule annotation
Gene namesi
Name:smpBUniRule annotation
Ordered Locus Names:BMEI1300
OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Taxonomic identifieri224914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000419: Chromosome I

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 158158SsrA-binding proteinPRO_0000102918Add
BLAST

Proteomic databases

PRIDEiP66858.

Interactioni

Protein-protein interaction databases

STRINGi224914.BMEI1300.

Structurei

3D structure databases

ProteinModelPortaliP66858.
SMRiP66858. Positions 11-132.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SmpB family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000009628.
KOiK03664.
OMAiQWIPLEN.
OrthoDBiEOG6HXJ9P.

Family and domain databases

Gene3Di2.40.280.10. 1 hit.
HAMAPiMF_00023. SmpB.
InterProiIPR023620. SmpB.
IPR000037. SsrA-bd_prot.
IPR020081. SsrA-bd_prot_CS.
[Graphical view]
PfamiPF01668. SmpB. 1 hit.
[Graphical view]
ProDomiPD004488. SmpB. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF74982. SSF74982. 1 hit.
TIGRFAMsiTIGR00086. smpB. 1 hit.
PROSITEiPS01317. SSRP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P66858-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNKPKNSPAR KMIAENRKAR FNFEILDTLE AGLVLTGTEV KSLRANQANI
60 70 80 90 100
AESYASFEDG EFWLINSYIP EYTQGNRFNH EPRRLRKLLV SRREMSRLFN
110 120 130 140 150
SVSREGMTVV PLKLYFNDRG RAKLELALAR GKKTHDKRET EKKRDWNREK

ARLLRDRG
Length:158
Mass (Da):18,570
Last modified:October 11, 2004 - v1
Checksum:iF034DAD1DDD08D6E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008917 Genomic DNA. Translation: AAL52481.1.
PIRiAF3414.
RefSeqiNP_540217.1. NC_003317.1.

Genome annotation databases

EnsemblBacteriaiAAL52481; AAL52481; BMEI1300.
GeneIDi1197011.
KEGGibme:BMEI1300.
PATRICi17797365. VBIBruMel146950_0501.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008917 Genomic DNA. Translation: AAL52481.1 .
PIRi AF3414.
RefSeqi NP_540217.1. NC_003317.1.

3D structure databases

ProteinModelPortali P66858.
SMRi P66858. Positions 11-132.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224914.BMEI1300.

Proteomic databases

PRIDEi P66858.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAL52481 ; AAL52481 ; BMEI1300 .
GeneIDi 1197011.
KEGGi bme:BMEI1300.
PATRICi 17797365. VBIBruMel146950_0501.

Phylogenomic databases

HOGENOMi HOG000009628.
KOi K03664.
OMAi QWIPLEN.
OrthoDBi EOG6HXJ9P.

Family and domain databases

Gene3Di 2.40.280.10. 1 hit.
HAMAPi MF_00023. SmpB.
InterProi IPR023620. SmpB.
IPR000037. SsrA-bd_prot.
IPR020081. SsrA-bd_prot_CS.
[Graphical view ]
Pfami PF01668. SmpB. 1 hit.
[Graphical view ]
ProDomi PD004488. SmpB. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF74982. SSF74982. 1 hit.
TIGRFAMsi TIGR00086. smpB. 1 hit.
PROSITEi PS01317. SSRP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 16M / ATCC 23456 / NCTC 10094.

Entry informationi

Entry nameiSSRP_BRUME
AccessioniPrimary (citable) accession number: P66858
Secondary accession number(s): Q8YG61
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: October 29, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella melitensis
    Brucella melitensis (strain 16M): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3