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P66858

- SSRP_BRUME

UniProt

P66858 - SSRP_BRUME

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Protein

SsrA-binding protein

Gene
smpB, BMEI1300
Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes By similarity.UniRule annotation

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
SsrA-binding protein
Gene namesi
Name:smpB
Ordered Locus Names:BMEI1300
OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Taxonomic identifieri224914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000419: Chromosome I

Subcellular locationi

Cytoplasm Reviewed prediction UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 158158SsrA-binding proteinUniRule annotationPRO_0000102918Add
BLAST

Proteomic databases

PRIDEiP66858.

Interactioni

Protein-protein interaction databases

STRINGi224914.BMEI1300.

Structurei

3D structure databases

ProteinModelPortaliP66858.
SMRiP66858. Positions 11-132.

Family & Domainsi

Sequence similaritiesi

Belongs to the SmpB family.

Phylogenomic databases

HOGENOMiHOG000009628.
KOiK03664.
OMAiQWIPLEN.
OrthoDBiEOG6HXJ9P.

Family and domain databases

Gene3Di2.40.280.10. 1 hit.
HAMAPiMF_00023. SmpB.
InterProiIPR023620. SmpB.
IPR000037. SsrA-bd_prot.
IPR020081. SsrA-bd_prot_CS.
[Graphical view]
PfamiPF01668. SmpB. 1 hit.
[Graphical view]
ProDomiPD004488. SmpB. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF74982. SSF74982. 1 hit.
TIGRFAMsiTIGR00086. smpB. 1 hit.
PROSITEiPS01317. SSRP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P66858-1 [UniParc]FASTAAdd to Basket

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MNKPKNSPAR KMIAENRKAR FNFEILDTLE AGLVLTGTEV KSLRANQANI    50
AESYASFEDG EFWLINSYIP EYTQGNRFNH EPRRLRKLLV SRREMSRLFN 100
SVSREGMTVV PLKLYFNDRG RAKLELALAR GKKTHDKRET EKKRDWNREK 150
ARLLRDRG 158
Length:158
Mass (Da):18,570
Last modified:October 11, 2004 - v1
Checksum:iF034DAD1DDD08D6E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE008917 Genomic DNA. Translation: AAL52481.1.
PIRiAF3414.
RefSeqiNP_540217.1. NC_003317.1.

Genome annotation databases

EnsemblBacteriaiAAL52481; AAL52481; BMEI1300.
GeneIDi1197011.
KEGGibme:BMEI1300.
PATRICi17797365. VBIBruMel146950_0501.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE008917 Genomic DNA. Translation: AAL52481.1 .
PIRi AF3414.
RefSeqi NP_540217.1. NC_003317.1.

3D structure databases

ProteinModelPortali P66858.
SMRi P66858. Positions 11-132.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224914.BMEI1300.

Proteomic databases

PRIDEi P66858.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAL52481 ; AAL52481 ; BMEI1300 .
GeneIDi 1197011.
KEGGi bme:BMEI1300.
PATRICi 17797365. VBIBruMel146950_0501.

Phylogenomic databases

HOGENOMi HOG000009628.
KOi K03664.
OMAi QWIPLEN.
OrthoDBi EOG6HXJ9P.

Family and domain databases

Gene3Di 2.40.280.10. 1 hit.
HAMAPi MF_00023. SmpB.
InterProi IPR023620. SmpB.
IPR000037. SsrA-bd_prot.
IPR020081. SsrA-bd_prot_CS.
[Graphical view ]
Pfami PF01668. SmpB. 1 hit.
[Graphical view ]
ProDomi PD004488. SmpB. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF74982. SSF74982. 1 hit.
TIGRFAMsi TIGR00086. smpB. 1 hit.
PROSITEi PS01317. SSRP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 16M / ATCC 23456 / NCTC 10094.

Entry informationi

Entry nameiSSRP_BRUME
AccessioniPrimary (citable) accession number: P66858
Secondary accession number(s): Q8YG61
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella melitensis
    Brucella melitensis (strain 16M): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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