Reviewed, UniProtKB/Swiss-Prot P66651 (RIMM_BRUME)

Names and origin

Protein names

Recommended name:
    Ribosome maturation factor rimM

Gene names

Name:	rimM
Ordered Locus Names:	BMEI0148

Organism

Brucella melitensis [Complete proteome] [HAMAP]

Taxonomic identifier

29459 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Brucella

Protein attributes

Sequence length	189 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after rbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes By similarity.
Subunit structure	Binds ribosomal protein S19 By similarity.
Subcellular location	Cytoplasm By similarity.
Domain	The PRC barrel domain binds ribosomal protein S19 By similarity.
Sequence similarities	Belongs to the rimM family. Contains 1 PRC barrel domain.

Ontologies

Keywords
Biological process	Ribosome biogenesis
Cellular component	Cytoplasm
Molecular function	Chaperone
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	rRNA processing Inferred from electronic annotation. Source: InterPro ribosomal small subunit biogenesis Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: InterPro
Molecular function	ribosome binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 189	189	Ribosome maturation factor rimM HAMAP MF_00014		PRO_0000163264
Regions
	Domain	96 – 169	74	PRC barrel

Sequences

	Sequence		Length	Mass (Da)
	P66651-1 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: 81FB87E6A60D690E	FASTA	189	20,554
	10 20 30 40 50 60 MPRPENPIQL AVIGAAHGTR GEVRVKTFTG DPLAIADYGL LYDEQGKAYE ILEARVAKTV 70 80 90 100 110 120 VIVRFKGVND RNAAEALNGT ELFIDRSQLP DEELDEDEFF QTDLIGLEAV DGDGKSYGVV 130 140 150 160 170 180 SAIFDFGGGD LIELSEKGKR PMLIPFTEAA VPEIDFDKGI IKVEPHAAGL IADEHDNPPH ESGKKPKKP

References

[1]

"The genome sequence of the facultative intracellular pathogen Brucella melitensis." DelVecchio V.G., Kapatral V., Redkar R.J., Patra G., Mujer C., Los T., Ivanova N., Anderson I., Bhattacharyya A., Lykidis A., Reznik G., Jablonski L., Larsen N., D'Souza M., Bernal A., Mazur M., Goltsman E., Selkov E. , Elzer P.H., Hagius S., O'Callaghan D., Letesson J.-J., Haselkorn R., Kyrpides N.C., Overbeek R. Proc. Natl. Acad. Sci. U.S.A. 99:443-448(2002) [PubMed: 11756688] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 16M / ATCC 23456 / NCTC 10094 / Biotype 1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE008917 Genomic DNA. Translation: AAL51330.1.
PIR	AG3270.
RefSeq	NP_539066.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1195860.
GenomeReviews	Gene locus BMEI0148 in contig AE008917_GR.
KEGG	bme:BMEI0148.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	P66651.
OMA	HNFGAGD
Enzyme and pathway databases
BioCyc	BMEL224914:BMEI0148-MON.
Family and domain databases
HAMAP	MF_00014. [Tree]
InterPro	IPR011961. 16S_RimM. IPR007903. PRC_barrel. IPR002676. RimM. [Graphical view]
Pfam	PF05239. PRC. 1 hit. PF01782. RimM. 1 hit. [Graphical view]
TIGRFAMs	TIGR02273. 16S_RimM. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RIMM_BRUME

Accession

Primary (citable) accession number: P66651
Secondary accession number(s): Q8YJD8

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 11, 2004
Last sequence update:	October 11, 2004
Last modified:	November 24, 2009
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)