Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S6

Gene

rpsF

Organism
Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds together with S18 to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciSAGA208435:GHVY-1810-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6UniRule annotation
Gene namesi
Name:rpsFUniRule annotation
Ordered Locus Names:SAG1714
OrganismiStreptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)
Taxonomic identifieri208435 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000000821 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 959530S ribosomal protein S6PRO_0000176846Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP66598.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S6P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000040440.
KOiK02990.
OMAiYEIQKKS.
OrthoDBiEOG6P33DH.

Family and domain databases

Gene3Di3.30.70.60. 1 hit.
HAMAPiMF_00360. Ribosomal_S6.
InterProiIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamiPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMiSSF54995. SSF54995. 1 hit.
TIGRFAMsiTIGR00166. S6. 1 hit.

Sequencei

Sequence statusi: Complete.

P66598-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKYEILYII RPNIEEEAKN ALVARFDSIL SDNGATVVES KDWEKRRLAY
60 70 80 90
EIQDFTEGLY HIVNVEAEDA VALNEFDRLS KINGDILRHM IVKVD
Length:95
Mass (Da):10,983
Last modified:October 11, 2004 - v1
Checksum:iB2017CCD7E8C57DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009948 Genomic DNA. Translation: AAN00577.1.
RefSeqiNP_688704.1. NC_004116.1.
WP_001151773.1. NC_004116.1.

Genome annotation databases

EnsemblBacteriaiAAN00577; AAN00577; SAG1714.
GeneIDi1014523.
KEGGisag:SAG1714.
PATRICi19630275. VBIStrAga72745_1722.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009948 Genomic DNA. Translation: AAN00577.1.
RefSeqiNP_688704.1. NC_004116.1.
WP_001151773.1. NC_004116.1.

3D structure databases

ProteinModelPortaliP66598.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN00577; AAN00577; SAG1714.
GeneIDi1014523.
KEGGisag:SAG1714.
PATRICi19630275. VBIStrAga72745_1722.

Phylogenomic databases

HOGENOMiHOG000040440.
KOiK02990.
OMAiYEIQKKS.
OrthoDBiEOG6P33DH.

Enzyme and pathway databases

BioCyciSAGA208435:GHVY-1810-MONOMER.

Family and domain databases

Gene3Di3.30.70.60. 1 hit.
HAMAPiMF_00360. Ribosomal_S6.
InterProiIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamiPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMiSSF54995. SSF54995. 1 hit.
TIGRFAMsiTIGR00166. S6. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-611 / 2603 V/R.

Entry informationi

Entry nameiRS6_STRA5
AccessioniPrimary (citable) accession number: P66598
Secondary accession number(s): Q8DXY1, Q8E3K0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: November 11, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.