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Protein

30S ribosomal protein S6

Gene

rpsF

Organism
Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds together with S18 to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciSAGA208435:GHVY-1810-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6UniRule annotation
Gene namesi
Name:rpsFUniRule annotation
Ordered Locus Names:SAG1714
OrganismiStreptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)
Taxonomic identifieri208435 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000000821: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 959530S ribosomal protein S6PRO_0000176846Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi208435.SAG1714.

Structurei

3D structure databases

ProteinModelPortaliP66598.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S6P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0360.
HOGENOMiHOG000040440.
KOiK02990.
OMAiYAVVNFT.
OrthoDBiEOG6P33DH.

Family and domain databases

Gene3Di3.30.70.60. 1 hit.
HAMAPiMF_00360. Ribosomal_S6.
InterProiIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamiPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMiSSF54995. SSF54995. 1 hit.
TIGRFAMsiTIGR00166. S6. 1 hit.

Sequencei

Sequence statusi: Complete.

P66598-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAKYEILYII RPNIEEEAKN ALVARFDSIL SDNGATVVES KDWEKRRLAY
60 70 80 90
EIQDFTEGLY HIVNVEAEDA VALNEFDRLS KINGDILRHM IVKVD
Length:95
Mass (Da):10,983
Last modified:October 11, 2004 - v1
Checksum:iB2017CCD7E8C57DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009948 Genomic DNA. Translation: AAN00577.1.
RefSeqiNP_688704.1. NC_004116.1.

Genome annotation databases

EnsemblBacteriaiAAN00577; AAN00577; SAG1714.
GeneIDi1014523.
KEGGisag:SAG1714.
PATRICi19630275. VBIStrAga72745_1722.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009948 Genomic DNA. Translation: AAN00577.1.
RefSeqiNP_688704.1. NC_004116.1.

3D structure databases

ProteinModelPortaliP66598.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208435.SAG1714.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN00577; AAN00577; SAG1714.
GeneIDi1014523.
KEGGisag:SAG1714.
PATRICi19630275. VBIStrAga72745_1722.

Phylogenomic databases

eggNOGiCOG0360.
HOGENOMiHOG000040440.
KOiK02990.
OMAiYAVVNFT.
OrthoDBiEOG6P33DH.

Enzyme and pathway databases

BioCyciSAGA208435:GHVY-1810-MONOMER.

Family and domain databases

Gene3Di3.30.70.60. 1 hit.
HAMAPiMF_00360. Ribosomal_S6.
InterProiIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamiPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMiSSF54995. SSF54995. 1 hit.
TIGRFAMsiTIGR00166. S6. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-611 / 2603 V/R.

Entry informationi

Entry nameiRS6_STRA5
AccessioniPrimary (citable) accession number: P66598
Secondary accession number(s): Q8DXY1, Q8E3K0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: January 7, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.