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Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds directly to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S20UniRule annotation
Gene namesi
Name:rpsTUniRule annotation
Ordered Locus Names:BMEI1944
OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Taxonomic identifieri224914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000419 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 888830S ribosomal protein S20PRO_0000167932Add
BLAST

Proteomic databases

PRIDEiP66501.

Interactioni

Protein-protein interaction databases

STRINGi224914.BAWG_0299.

Structurei

3D structure databases

ProteinModelPortaliP66501.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S20P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000097049.
KOiK02968.
OMAiFEPEIMR.
OrthoDBiEOG6HMXNQ.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20.
InterProiIPR002583. Ribosomal_S20.
[Graphical view]
PfamiPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomiPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.

Sequencei

Sequence statusi: Complete.

P66501-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANTPSAKKA VRKIAARTEI NKSRRSRVRT FVRKLEDALL SGDKQAAEVA
60 70 80
FKAVEPELMR AASKGVVHKN TAARKVSRLA KRVKALNA
Length:88
Mass (Da):9,669
Last modified:October 11, 2004 - v1
Checksum:i72497E5512D90789
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008917 Genomic DNA. Translation: AAL53125.1.
PIRiAB3495.
RefSeqiNP_540861.1. NC_003317.1.
WP_002965247.1. NZ_GG703778.1.

Genome annotation databases

EnsemblBacteriaiAAL53125; AAL53125; BMEI1944.
GeneIDi3788957.
KEGGibme:BMEI1944.
PATRICi17795968. VBIBruMel146950_1255.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008917 Genomic DNA. Translation: AAL53125.1.
PIRiAB3495.
RefSeqiNP_540861.1. NC_003317.1.
WP_002965247.1. NZ_GG703778.1.

3D structure databases

ProteinModelPortaliP66501.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224914.BAWG_0299.

Proteomic databases

PRIDEiP66501.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL53125; AAL53125; BMEI1944.
GeneIDi3788957.
KEGGibme:BMEI1944.
PATRICi17795968. VBIBruMel146950_1255.

Phylogenomic databases

HOGENOMiHOG000097049.
KOiK02968.
OMAiFEPEIMR.
OrthoDBiEOG6HMXNQ.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20.
InterProiIPR002583. Ribosomal_S20.
[Graphical view]
PfamiPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomiPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 16M / ATCC 23456 / NCTC 10094.

Entry informationi

Entry nameiRS20_BRUME
AccessioniPrimary (citable) accession number: P66501
Secondary accession number(s): Q8YED4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: June 24, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella melitensis
    Brucella melitensis (strain 16M): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.