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Protein

30S ribosomal protein S10

Gene

rpsJ

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the binding of tRNA to the ribosomes.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S10UniRule annotation
Gene namesi
Name:rpsJUniRule annotation
Ordered Locus Names:BR1234, BS1330_I1230
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000007104 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 10210230S ribosomal protein S10PRO_0000146508Add
BLAST

Proteomic databases

PRIDEiP66325.

Structurei

3D structure databases

ProteinModelPortaliP66325.
SMRiP66325. Positions 6-102.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S10P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0051.
HOGENOMiHOG000270246.
KOiK02946.
OMAiEMRIHAR.
OrthoDBiEOG6VXFHB.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P66325-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNGQNIRIRL KAFDHRILDA STREIVSTAK RTGANVRGPI PLPTRIEKFT
60 70 80 90 100
VNRSPHIDKK SREQFEMRTH KRLLDIVDPT PQTVDALMKL DLSAGVDVEI

KL
Length:102
Mass (Da):11,628
Last modified:October 11, 2004 - v1
Checksum:iAD865932CED86378
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30153.1.
CP002997 Genomic DNA. Translation: AEM18571.1.
RefSeqiWP_002964363.1. NZ_KN046804.1.

Genome annotation databases

EnsemblBacteriaiAAN30153; AAN30153; BR1234.
AEM18571; AEM18571; BS1330_I1230.
GeneIDi5381015.
KEGGibms:BR1234.
bsi:BS1330_I1230.
PATRICi17790805. VBIBruSui107850_1256.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30153.1.
CP002997 Genomic DNA. Translation: AEM18571.1.
RefSeqiWP_002964363.1. NZ_KN046804.1.

3D structure databases

ProteinModelPortaliP66325.
SMRiP66325. Positions 6-102.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiP66325.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN30153; AAN30153; BR1234.
AEM18571; AEM18571; BS1330_I1230.
GeneIDi5381015.
KEGGibms:BR1234.
bsi:BS1330_I1230.
PATRICi17790805. VBIBruSui107850_1256.

Phylogenomic databases

eggNOGiCOG0051.
HOGENOMiHOG000270246.
KOiK02946.
OMAiEMRIHAR.
OrthoDBiEOG6VXFHB.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.

Entry informationi

Entry nameiRS10_BRUSU
AccessioniPrimary (citable) accession number: P66325
Secondary accession number(s): G0KAF5, Q8YHP1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: July 22, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.