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Protein

50S ribosomal protein L31

Gene

rpmE

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds the 23S rRNA.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-KW
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciHPY:HP0551-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L31UniRule annotation
Gene namesi
Name:rpmEUniRule annotation
Ordered Locus Names:HP_0551
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000000429: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 676750S ribosomal protein L31PRO_0000173115Add
BLAST

Proteomic databases

PRIDEiP66185.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

IntActiP66185. 1 interaction.
STRINGi85962.HP0551.

Structurei

3D structure databases

ProteinModelPortaliP66185.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L31P family. Type A subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0254.
KOiK02909.
OMAiCACGNEI.
OrthoDBiEOG6DVJZM.

Family and domain databases

HAMAPiMF_00501. Ribosomal_L31_1.
InterProiIPR002150. Ribosomal_L31.
IPR027491. Ribosomal_L31_A.
[Graphical view]
PfamiPF01197. Ribosomal_L31. 1 hit.
[Graphical view]
PRINTSiPR01249. RIBOSOMALL31.
TIGRFAMsiTIGR00105. L31. 1 hit.
PROSITEiPS01143. RIBOSOMAL_L31. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P66185-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKGIHPEYI PCKVTCVTSG KEIEVLSTKP EMRIDISSFC HPFYTGSDKI
60
ADTAGRVEKF KQRYNLK
Length:67
Mass (Da):7,652
Last modified:October 11, 2004 - v1
Checksum:iD8993C4F42319FAE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07617.1.
PIRiG64588.
RefSeqiNP_207346.1. NC_000915.1.
YP_006934474.1. NC_018939.1.

Genome annotation databases

EnsemblBacteriaiAAD07617; AAD07617; HP_0551.
GeneIDi13869742.
900000.
KEGGiheo:C694_02850.
hpy:HP0551.
PATRICi20592377. VBIHelPyl33062_0577.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07617.1.
PIRiG64588.
RefSeqiNP_207346.1. NC_000915.1.
YP_006934474.1. NC_018939.1.

3D structure databases

ProteinModelPortaliP66185.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP66185. 1 interaction.
STRINGi85962.HP0551.

Proteomic databases

PRIDEiP66185.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD07617; AAD07617; HP_0551.
GeneIDi13869742.
900000.
KEGGiheo:C694_02850.
hpy:HP0551.
PATRICi20592377. VBIHelPyl33062_0577.

Phylogenomic databases

eggNOGiCOG0254.
KOiK02909.
OMAiCACGNEI.
OrthoDBiEOG6DVJZM.

Enzyme and pathway databases

BioCyciHPY:HP0551-MONOMER.

Family and domain databases

HAMAPiMF_00501. Ribosomal_L31_1.
InterProiIPR002150. Ribosomal_L31.
IPR027491. Ribosomal_L31_A.
[Graphical view]
PfamiPF01197. Ribosomal_L31. 1 hit.
[Graphical view]
PRINTSiPR01249. RIBOSOMALL31.
TIGRFAMsiTIGR00105. L31. 1 hit.
PROSITEiPS01143. RIBOSOMAL_L31. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700392 / 26695.

Entry informationi

Entry nameiRL31_HELPY
AccessioniPrimary (citable) accession number: P66185
Secondary accession number(s): P56053
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: January 7, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.