P66052 (RL11_HELPY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L11

Gene names

Name:	rplK
Ordered Locus Names:	HP_1202

Organism

Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) [Reference proteome] [HAMAP]

Taxonomic identifier

85962 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	141 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein binds directly to 23S ribosomal RNA By similarity. HAMAP-Rule MF_00736_B
Post-translational modification	One or more lysine residues are methylated By similarity.
Sequence similarities	Belongs to the ribosomal protein L11P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
PTM	Methylation
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 141	141	50S ribosomal protein L11 HAMAP-Rule MF_00736_B		PRO_0000104296

Sequences

	Sequence		Length	Mass (Da)
	P66052 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: D1BE047F62F5FAAB	FASTA	141	15,329
	10 20 30 40 50 60 MAKKVVGEIK LQIPAGKANP SPPVGPALGQ RGVNIMEFCK AFNERTKDMG SFNIPVIITV 70 80 90 100 110 120 YQDKSFTFIT KKPPVTDLIK KASGVEKGSD NPLKNKIAKL THKQVEEIAQ LKMEDLNTST 130 140 MEAAKKIVMG SARSMGVEVV D

References

[1]

"The complete genome sequence of the gastric pathogen Helicobacter pylori." Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A., Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N., Loftus B.J., Richardson D.L., Dodson R.J. , Khalak H.G., Glodek A., McKenney K., FitzGerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E., Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Cotton M.D., Weidman J.F., Fujii C., Bowman C., Watthey L., Wallin E., Hayes W.S., Borodovsky M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C. Nature 388:539-547(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700392 / 26695.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000511 Genomic DNA. Translation: AAD08248.1.
PIR	B64670.
RefSeq	NP_207993.1. NC_000915.1. YP_006935122.1. NC_018939.1.
3D structure databases
ProteinModelPortal	P66052.
SMR	P66052. Positions 1-141.
ModBase	Search...
Protein-protein interaction databases
MINT	MINT-4076533.
STRING	85962.HP1202.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAD08248; AAD08248; HP_1202.
GeneID	13870402. 899964.
KEGG	heo:C694_06220. hpy:HP1202.
PATRIC	20593763. VBIHelPyl33062_1259.
Phylogenomic databases
eggNOG	COG0080.
KO	K02867.
OMA	KQFNAKT.
ProtClustDB	PRK00140.
Family and domain databases
Gene3D	1.10.10.250. 1 hit. 3.30.1550.10. 1 hit.
HAMAP	MF_00736_B. Ribosomal_L11_B.
InterPro	IPR000911. Ribosomal_L11. IPR006519. Ribosomal_L11_bac-typ. IPR020783. Ribosomal_L11_C. IPR020785. Ribosomal_L11_CS. IPR020784. Ribosomal_L11_N. [Graphical view]
PANTHER	PTHR11661. PTHR11661. 1 hit.
Pfam	PF00298. Ribosomal_L11. 1 hit. PF03946. Ribosomal_L11_N. 1 hit. [Graphical view]
SMART	SM00649. RL11. 1 hit. [Graphical view]
SUPFAM	SSF46906. Ribosomal_L11. 1 hit. SSF54747. Ribosomal_L11. 1 hit.
TIGRFAMs	TIGR01632. L11_bact. 1 hit.
PROSITE	PS00359. RIBOSOMAL_L11. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL11_HELPY

Accession

Primary (citable) accession number: P66052
Secondary accession number(s): P56037

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 11, 2004
Last sequence update:	October 11, 2004
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program