Reviewed, UniProtKB/Swiss-Prot P65604 (OTCC1_STRA5)

Names and origin

Protein names

Recommended name:
    Ornithine carbamoyltransferase 1, catabolic
      Short name=OTCase 1
    EC=2.1.3.3

Gene names

Name:	arcB1
Ordered Locus Names:	SAG2126

Organism

Streptococcus agalactiae serotype V [Complete proteome] [HAMAP]

Taxonomic identifier

216466 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Streptococcaceae › Streptococcus

Protein attributes

Sequence length	332 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	Carbamoyl phosphate + L-ornithine = phosphate + L-citrulline. HAMAP MF_01109
Pathway	Amino-acid degradation; L-arginine degradation via ADI pathway; carbamoyl phosphate from L-arginine: step 2/2. HAMAP MF_01109
Subcellular location	Cytoplasm Probable.
Sequence similarities	Belongs to the ATCase/OTCase family.

Ontologies

Keywords
Biological process	Arginine metabolism
Cellular component	Cytoplasm
Molecular function	Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	arginine metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	ornithine carbamoyltransferase complex Inferred from electronic annotation. Source: InterPro
Molecular function	amino acid binding Inferred from electronic annotation. Source: InterPro ornithine carbamoyltransferase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 332	332	Ornithine carbamoyltransferase 1, catabolic HAMAP MF_01109		PRO_0000113026
Regions
	Region	56 – 60	5	Carbamoyl phosphate binding By similarity
	Region	272 – 275	4	Ornithine binding By similarity
Sites
	Binding site	107	1	Carbamoyl phosphate By similarity
	Binding site	134	1	Carbamoyl phosphate By similarity
	Site	31	1	Important for structural integrity By similarity
	Site	147	1	Important for structural integrity By similarity

Sequences

	Sequence		Length	Mass (Da)
	P65604-1 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: B51A22BF6135652B	FASTA	332	37,220
	10 20 30 40 50 60 MKNLRNRSFL TLLDFSTAEV EFLLKLSEDL KRAKYAGIEQ QKLVGKNIAL IFEKDSTRTR 70 80 90 100 110 120 CAFEVAAHDQ GAHVTYLGPT GSQMGKKETS KDTARVLGGM YDGIEYRGFS QETVETLAEF 130 140 150 160 170 180 SGVPVWNGLT DADHPTQVLA DFLTAKECLH KPYKDIRFTY VGDGRNNVAN ALMIGASIVG 190 200 210 220 230 240 MTYHLVCPKE LEPDPELLSK CQEIAKTTGA SIEITADIAE GVRDSDVLYT DVWVSMGEPD 250 260 270 280 290 300 EVWKERIALL EPYRITQEML NMTENPNVIF EHCLPSFHNI DTKVGYDIYE KYGLKEMEVS 310 320 330 DEVFEGPHSV VFQEAENRMH TIKAVMVATL GD

References

[1]

"Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae." Tettelin H., Masignani V., Cieslewicz M.J., Eisen J.A., Peterson S.N., Wessels M.R., Paulsen I.T., Nelson K.E., Margarit I., Read T.D., Madoff L.C., Wolf A.M., Beanan M.J., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Kolonay J.F. , Madupu R., Lewis M.R., Radune D., Fedorova N.B., Scanlan D., Khouri H.M., Mulligan S., Carty H.A., Cline R.T., Van Aken S.E., Gill J., Scarselli M., Mora M., Iacobini E.T., Brettoni C., Galli G., Mariani M., Vegni F., Maione D., Rinaudo D., Rappuoli R., Telford J.L., Kasper D.L., Grandi G., Fraser C.M. Proc. Natl. Acad. Sci. U.S.A. 99:12391-12396(2002) [PubMed: 12200547] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-611 / 2603 V/R / Serotype V.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE009948 Genomic DNA. Translation: AAN00984.1.
RefSeq	NP_689111.1.
3D structure databases
HSSP	HSSP built from PDB template 1AKM based on UniProtKB P04391.
ModBase	Search...
Genome annotation databases
GeneID	1014937.
GenomeReviews	Gene locus SAG2126 in contig AE009948_GR.
KEGG	sag:SAG2126.
TIGR	SAG2126.
Phylogenomic databases
HOGENOM	P65604.
OMA	NPNVKFM.
Family and domain databases
HAMAP	MF_01109. [Tree]
InterPro	IPR006132. Asp/Orn_carbamoyltranf_P_bd. IPR006130. Asp/Orn_carbamoylTrfase. IPR006131. Asp_carbamoyltransf_Asp/Orn_bd. IPR002292. Orn_carbamltrans. [Graphical view]
Pfam	PF00185. OTCace. 1 hit. PF02729. OTCace_N. 1 hit. [Graphical view]
PRINTS	PR00100. AOTCASE. PR00102. OTCASE.
TIGRFAMs	TIGR00658. orni_carb_tr. 1 hit.
PROSITE	PS00097. CARBAMOYLTRANSFERASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

OTCC1_STRA5

Accession

Primary (citable) accession number: P65604
Secondary accession number(s): Q8DWT7, Q8E2N7

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 11, 2004
Last sequence update:	October 11, 2004
Last modified:	November 3, 2009
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)