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Protein

Uncharacterized protein YqcA

Gene

yqcA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probable electron transporter.

Cofactori

FMNBy similarity

GO - Molecular functioni

  • FMN binding Source: EcoCyc

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Electron transport, Transport

Keywords - Ligandi

Flavoprotein, FMN

Enzyme and pathway databases

BioCyciEcoCyc:G7448-MONOMER.
ECOL316407:JW2761-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YqcA
Gene namesi
Name:yqcA
Ordered Locus Names:b2790, JW2761
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13170. yqcA.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 149149Uncharacterized protein YqcAPRO_0000196577Add
BLAST

Proteomic databases

PaxDbiP65367.
PRIDEiP65367.

Interactioni

Protein-protein interaction databases

BioGridi4261741. 20 interactions.
DIPiDIP-48153N.
IntActiP65367. 6 interactions.
STRINGi511145.b2790.

Structurei

3D structure databases

ProteinModelPortaliP65367.
SMRiP65367. Positions 1-149.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4 – 145142Flavodoxin-likePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the flavodoxin family. MioC subfamily.Curated
Contains 1 flavodoxin-like domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105QDK. Bacteria.
COG0716. LUCA.
HOGENOMiHOG000030545.
InParanoidiP65367.
OMAiYQPELRY.
OrthoDBiEOG6VB6XD.
PhylomeDBiP65367.

Family and domain databases

Gene3Di3.40.50.360. 1 hit.
InterProiIPR001094. Flavdoxin-like.
IPR008254. Flavodoxin/NO_synth.
IPR029039. Flavoprotein-like_dom.
[Graphical view]
PfamiPF00258. Flavodoxin_1. 1 hit.
[Graphical view]
PRINTSiPR00369. FLAVODOXIN.
SUPFAMiSSF52218. SSF52218. 1 hit.
PROSITEiPS50902. FLAVODOXIN_LIKE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P65367-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEIGIFVGT MYGNSLLVAE EAEAILTAQG HKATVFEDPE LSDWLPYQDK
60 70 80 90 100
YVLVVTSTTG QGDLPDSIVP LFQGIKDSLG FQPNLRYGVI ALGDSSYVNF
110 120 130 140
CNGGKQFDAL LQEQSAQRVG EMLLIDASEN PEPETESNPW VEQWGTLLS
Length:149
Mass (Da):16,274
Last modified:October 11, 2004 - v1
Checksum:i477B51ABB432999D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29581 Genomic DNA. Translation: AAB40440.1.
U00096 Genomic DNA. Translation: AAC75832.1.
AP009048 Genomic DNA. Translation: BAE76862.1.
PIRiB65061.
RefSeqiNP_417270.1. NC_000913.3.
WP_000807753.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75832; AAC75832; b2790.
BAE76862; BAE76862; BAE76862.
GeneIDi947151.
KEGGiecj:JW2761.
eco:b2790.
PATRICi32120996. VBIEscCol129921_2890.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29581 Genomic DNA. Translation: AAB40440.1.
U00096 Genomic DNA. Translation: AAC75832.1.
AP009048 Genomic DNA. Translation: BAE76862.1.
PIRiB65061.
RefSeqiNP_417270.1. NC_000913.3.
WP_000807753.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP65367.
SMRiP65367. Positions 1-149.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261741. 20 interactions.
DIPiDIP-48153N.
IntActiP65367. 6 interactions.
STRINGi511145.b2790.

Proteomic databases

PaxDbiP65367.
PRIDEiP65367.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75832; AAC75832; b2790.
BAE76862; BAE76862; BAE76862.
GeneIDi947151.
KEGGiecj:JW2761.
eco:b2790.
PATRICi32120996. VBIEscCol129921_2890.

Organism-specific databases

EchoBASEiEB2962.
EcoGeneiEG13170. yqcA.

Phylogenomic databases

eggNOGiENOG4105QDK. Bacteria.
COG0716. LUCA.
HOGENOMiHOG000030545.
InParanoidiP65367.
OMAiYQPELRY.
OrthoDBiEOG6VB6XD.
PhylomeDBiP65367.

Enzyme and pathway databases

BioCyciEcoCyc:G7448-MONOMER.
ECOL316407:JW2761-MONOMER.

Miscellaneous databases

PROiP65367.

Family and domain databases

Gene3Di3.40.50.360. 1 hit.
InterProiIPR001094. Flavdoxin-like.
IPR008254. Flavodoxin/NO_synth.
IPR029039. Flavoprotein-like_dom.
[Graphical view]
PfamiPF00258. Flavodoxin_1. 1 hit.
[Graphical view]
PRINTSiPR00369. FLAVODOXIN.
SUPFAMiSSF52218. SSF52218. 1 hit.
PROSITEiPS50902. FLAVODOXIN_LIKE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYQCA_ECOLI
AccessioniPrimary (citable) accession number: P65367
Secondary accession number(s): Q2MA44, Q46917
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: July 6, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.