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Protein

Uncharacterized protein YhcO

Gene

yhcO

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7684-MONOMER.
ECOL316407:JW3208-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YhcO
Gene namesi
Name:yhcO
Ordered Locus Names:b3239, JW3208
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12821. yhcO.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9090Uncharacterized protein YhcOPRO_0000169489Add
BLAST

Proteomic databases

PaxDbiP64616.

Interactioni

Protein-protein interaction databases

BioGridi4263434. 4 interactions.
DIPiDIP-48199N.
IntActiP64616. 18 interactions.
STRINGi511145.b3239.

Structurei

3D structure databases

ProteinModelPortaliP64616.
SMRiP64616. Positions 1-90.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the barstar family.Curated

Phylogenomic databases

eggNOGiENOG4105UNR. Bacteria.
COG2732. LUCA.
HOGENOMiHOG000125272.
InParanoidiP64616.
KOiK03623.
OMAiGQLRFNV.

Family and domain databases

Gene3Di3.30.370.10. 1 hit.
InterProiIPR000468. Barstar.
[Graphical view]
PfamiPF01337. Barstar. 1 hit.
[Graphical view]
SUPFAMiSSF52038. SSF52038. 1 hit.

Sequencei

Sequence statusi: Complete.

P64616-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIYTFDFDE IESQEDFYRD FSQTFGLAKD KVRDLDSLWD VLMNDVLPLP
60 70 80 90
LEIEFVHLGE KTRRRFGALI LLFDEAEEEL EGHLRFNVRH
Length:90
Mass (Da):10,796
Last modified:October 11, 2004 - v1
Checksum:iADB2EC5EDA975ACA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58041.1.
U00096 Genomic DNA. Translation: AAC76271.1.
AP009048 Genomic DNA. Translation: BAE77282.1.
PIRiA65116.
RefSeqiNP_417706.1. NC_000913.3.
WP_001029013.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76271; AAC76271; b3239.
BAE77282; BAE77282; BAE77282.
GeneIDi947830.
KEGGiecj:JW3208.
eco:b3239.
PATRICi32121904. VBIEscCol129921_3336.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58041.1.
U00096 Genomic DNA. Translation: AAC76271.1.
AP009048 Genomic DNA. Translation: BAE77282.1.
PIRiA65116.
RefSeqiNP_417706.1. NC_000913.3.
WP_001029013.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP64616.
SMRiP64616. Positions 1-90.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263434. 4 interactions.
DIPiDIP-48199N.
IntActiP64616. 18 interactions.
STRINGi511145.b3239.

Proteomic databases

PaxDbiP64616.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76271; AAC76271; b3239.
BAE77282; BAE77282; BAE77282.
GeneIDi947830.
KEGGiecj:JW3208.
eco:b3239.
PATRICi32121904. VBIEscCol129921_3336.

Organism-specific databases

EchoBASEiEB2672.
EcoGeneiEG12821. yhcO.

Phylogenomic databases

eggNOGiENOG4105UNR. Bacteria.
COG2732. LUCA.
HOGENOMiHOG000125272.
InParanoidiP64616.
KOiK03623.
OMAiGQLRFNV.

Enzyme and pathway databases

BioCyciEcoCyc:G7684-MONOMER.
ECOL316407:JW3208-MONOMER.

Miscellaneous databases

PROiP64616.

Family and domain databases

Gene3Di3.30.370.10. 1 hit.
InterProiIPR000468. Barstar.
[Graphical view]
PfamiPF01337. Barstar. 1 hit.
[Graphical view]
SUPFAMiSSF52038. SSF52038. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYHCO_ECOLI
AccessioniPrimary (citable) accession number: P64616
Secondary accession number(s): P46480, Q2M8X4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: September 7, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.