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Protein

Uncharacterized protein YraP

Gene

yraP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7644-MONOMER.
ECOL316407:JW3119-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YraP
Gene namesi
Name:yraP
Ordered Locus Names:b3150, JW3119
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12781. yraP.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323PROSITE-ProRule annotationAdd
BLAST
Chaini24 – 191168Uncharacterized protein YraPPRO_0000013909Add
BLAST

Proteomic databases

EPDiP64596.
PaxDbiP64596.
PRIDEiP64596.

Interactioni

Protein-protein interaction databases

BioGridi4261992. 331 interactions.
IntActiP64596. 1 interaction.
STRINGi511145.b3150.

Structurei

3D structure databases

ProteinModelPortaliP64596.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini46 – 11570BON 1PROSITE-ProRule annotationAdd
BLAST
Domaini124 – 19168BON 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 2 BON domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiENOG4105W4M. Bacteria.
COG2823. LUCA.
HOGENOMiHOG000254779.
InParanoidiP64596.
OMAiMLQGCIG.
OrthoDBiEOG6C5RQ0.
PhylomeDBiP64596.

Family and domain databases

InterProiIPR007055. BON_dom.
IPR014004. Transpt-assoc_nodulatn_dom_bac.
[Graphical view]
PfamiPF04972. BON. 2 hits.
[Graphical view]
SMARTiSM00749. BON. 2 hits.
[Graphical view]
PROSITEiPS50914. BON. 2 hits.
PS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P64596-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKALSPIAVL ISALLLQGCV AAAVVGTAAV GTKAATDPRS VGTQVDDGTL
60 70 80 90 100
EVRVNSALSK DEQIKKEARI NVTAYQGKVL LVGQSPNAEL SARAKQIAMG
110 120 130 140 150
VDGANEVYNE IRQGQPIGLG EASNDTWITT KVRSQLLTSD LVKSSNVKVT
160 170 180 190
TENGEVFLMG LVTEREAKAA ADIASRVSGV KRVTTAFTFI K
Length:191
Mass (Da):20,028
Last modified:October 11, 2004 - v1
Checksum:i6DB2A37333B83D94
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA57953.1.
U00096 Genomic DNA. Translation: AAC76184.1.
AP009048 Genomic DNA. Translation: BAE77196.1.
PIRiB65105.
RefSeqiNP_417619.1. NC_000913.3.
WP_000646033.1. NZ_CP014272.1.

Genome annotation databases

EnsemblBacteriaiAAC76184; AAC76184; b3150.
BAE77196; BAE77196; BAE77196.
GeneIDi947659.
KEGGiecj:JW3119.
eco:b3150.
PATRICi32121718. VBIEscCol129921_3245.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA57953.1.
U00096 Genomic DNA. Translation: AAC76184.1.
AP009048 Genomic DNA. Translation: BAE77196.1.
PIRiB65105.
RefSeqiNP_417619.1. NC_000913.3.
WP_000646033.1. NZ_CP014272.1.

3D structure databases

ProteinModelPortaliP64596.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261992. 331 interactions.
IntActiP64596. 1 interaction.
STRINGi511145.b3150.

Proteomic databases

EPDiP64596.
PaxDbiP64596.
PRIDEiP64596.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76184; AAC76184; b3150.
BAE77196; BAE77196; BAE77196.
GeneIDi947659.
KEGGiecj:JW3119.
eco:b3150.
PATRICi32121718. VBIEscCol129921_3245.

Organism-specific databases

EchoBASEiEB2634.
EcoGeneiEG12781. yraP.

Phylogenomic databases

eggNOGiENOG4105W4M. Bacteria.
COG2823. LUCA.
HOGENOMiHOG000254779.
InParanoidiP64596.
OMAiMLQGCIG.
OrthoDBiEOG6C5RQ0.
PhylomeDBiP64596.

Enzyme and pathway databases

BioCyciEcoCyc:G7644-MONOMER.
ECOL316407:JW3119-MONOMER.

Miscellaneous databases

PROiP64596.

Family and domain databases

InterProiIPR007055. BON_dom.
IPR014004. Transpt-assoc_nodulatn_dom_bac.
[Graphical view]
PfamiPF04972. BON. 2 hits.
[Graphical view]
SMARTiSM00749. BON. 2 hits.
[Graphical view]
PROSITEiPS50914. BON. 2 hits.
PS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYRAP_ECOLI
AccessioniPrimary (citable) accession number: P64596
Secondary accession number(s): P45467, Q2M960
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: May 11, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.