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Protein

Transcriptional repressor RcnR

Gene

rcnR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Repressor of rcnA expression. Acts by binding specifically to the rcnA promoter in the absence of nickel and cobalt. In the presence of one of these metals, it has a weaker affinity for rcnA promoter.2 Publications

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding, Repressor
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:G7137-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Transcriptional repressor RcnR
Gene namesi
Name:rcnR
Synonyms:yohL
Ordered Locus Names:b2105, JW2092
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14070 rcnR

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001691431 – 90Transcriptional repressor RcnRAdd BLAST90

Proteomic databases

PaxDbiP64530
PRIDEiP64530

Interactioni

Protein-protein interaction databases

BioGridi4261164, 9 interactors
IntActiP64530, 8 interactors
STRINGi316385.ECDH10B_2258

Structurei

3D structure databases

ProteinModelPortaliP64530
SMRiP64530
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FrmR/RcnR family.Curated

Phylogenomic databases

eggNOGiENOG41090EM Bacteria
COG1937 LUCA
HOGENOMiHOG000023914
InParanoidiP64530
OMAiEHECAEI
PhylomeDBiP64530

Family and domain databases

Gene3Di1.20.58.1000, 1 hit
InterProiView protein in InterPro
IPR003735 Metal_Tscrpt_repr
IPR038390 Metal_Tscrpt_repr_sf
PANTHERiPTHR33677 PTHR33677, 1 hit
PfamiView protein in Pfam
PF02583 Trns_repr_metal, 1 hit

Sequencei

Sequence statusi: Complete.

P64530-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSHTIRDKQK LKARASKIQG QVVALKKMLD EPHECAAVLQ QIAAIRGAVN
60 70 80 90
GLMREVIKGH LTEHIVHQGD ELKREEDLDV VLKVLDSYIK
Length:90
Mass (Da):10,134
Last modified:October 11, 2004 - v1
Checksum:iBEF3E5AE971AA2F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC75166.1
AP009048 Genomic DNA Translation: BAE76586.1
PIRiH64977
RefSeqiNP_416608.1, NC_000913.3
WP_000019944.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75166; AAC75166; b2105
BAE76586; BAE76586; BAE76586
GeneIDi947114
KEGGiecj:JW2092
eco:b2105
PATRICifig|1411691.4.peg.142

Similar proteinsi

Entry informationi

Entry nameiRCNR_ECOLI
AccessioniPrimary (citable) accession number: P64530
Secondary accession number(s): P76424, Q2MAX0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: March 28, 2018
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health