Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YodC

Gene

yodC

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7050-MONOMER.
ECOL316407:JW1940-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YodC
Gene namesi
Name:yodC
Ordered Locus Names:b1957, JW1940
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14307. yodC.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001691021 – 60Uncharacterized protein YodCAdd BLAST60

Proteomic databases

PaxDbiP64517.
PRIDEiP64517.

Interactioni

Protein-protein interaction databases

BioGridi4261053. 11 interactors.
DIPiDIP-48226N.
IntActiP64517. 4 interactors.
STRINGi511145.b1957.

Structurei

3D structure databases

ProteinModelPortaliP64517.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105VNZ. Bacteria.
COG5475. LUCA.
HOGENOMiHOG000267964.
OMAiKNGGPRM.

Family and domain databases

InterProiIPR019226. DUF2158.
[Graphical view]
PfamiPF09926. DUF2158. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P64517-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFMVSEEVT VKEGGPRMIV TGYSSGMVEC RWYDGYGVKR EAFHETELVP
60
GEGSRSAEEV
Length:60
Mass (Da):6,678
Last modified:October 11, 2004 - v1
Checksum:i1D05C2D0FC6A68C5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75023.1.
AP009048 Genomic DNA. Translation: BAE76556.1.
PIRiA64960.
RefSeqiNP_416466.1. NC_000913.3.
WP_000009307.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75023; AAC75023; b1957.
BAE76556; BAE76556; BAE76556.
GeneIDi946466.
KEGGiecj:JW1940.
eco:b1957.
PATRICi32119243. VBIEscCol129921_2036.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75023.1.
AP009048 Genomic DNA. Translation: BAE76556.1.
PIRiA64960.
RefSeqiNP_416466.1. NC_000913.3.
WP_000009307.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP64517.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261053. 11 interactors.
DIPiDIP-48226N.
IntActiP64517. 4 interactors.
STRINGi511145.b1957.

Proteomic databases

PaxDbiP64517.
PRIDEiP64517.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75023; AAC75023; b1957.
BAE76556; BAE76556; BAE76556.
GeneIDi946466.
KEGGiecj:JW1940.
eco:b1957.
PATRICi32119243. VBIEscCol129921_2036.

Organism-specific databases

EchoBASEiEB4054.
EcoGeneiEG14307. yodC.

Phylogenomic databases

eggNOGiENOG4105VNZ. Bacteria.
COG5475. LUCA.
HOGENOMiHOG000267964.
OMAiKNGGPRM.

Enzyme and pathway databases

BioCyciEcoCyc:G7050-MONOMER.
ECOL316407:JW1940-MONOMER.

Miscellaneous databases

PROiP64517.

Family and domain databases

InterProiIPR019226. DUF2158.
[Graphical view]
PfamiPF09926. DUF2158. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYODC_ECOLI
AccessioniPrimary (citable) accession number: P64517
Secondary accession number(s): P76331, Q2MB00
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: November 2, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.