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Protein

Protein YobF

Gene

yobF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • cellular response to cell envelope stress Source: EcoCyc
  • cellular response to heat Source: EcoCyc
  • cellular stress response to acid chemical Source: EcoCyc

Keywordsi

Biological processStress response

Enzyme and pathway databases

BioCyciEcoCyc:G7000-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YobF
Gene namesi
Name:yobF
Ordered Locus Names:b1824, JW1813
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14382. yobF.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001690621 – 47Protein YobFAdd BLAST47

Proteomic databases

PaxDbiP64508.
PRIDEiP64508.

Expressioni

Inductioni

Expressed during stationary phase, induced at 45 degrees Celsius (at protein level), at a post-transcriptional level.2 Publications

Interactioni

Protein-protein interaction databases

BioGridi4259147. 8 interactors.
STRINGi511145.b1824.

Structurei

3D structure databases

ProteinModelPortaliP64508.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the YobF/DUF2527 family.Curated

Phylogenomic databases

HOGENOMiHOG000009489.

Family and domain databases

InterProiView protein in InterPro
IPR019672. DUF2527.
PfamiView protein in Pfam
PF10736. DUF2527. 1 hit.

Sequencei

Sequence statusi: Complete.

P64508-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40 
MCGIFSKEVL SKHVDVEYRF SAEPYIGASC SNVSVLSMLC LRAKKTI
Length:47
Mass (Da):5,212
Last modified:October 11, 2004 - v1
Checksum:i54E439F3531D708F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74894.1.
AP009048 Genomic DNA. Translation: BAE76537.1.
PIRiH64943.
RefSeqiNP_416338.1. NC_000913.3.
WP_001295496.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74894; AAC74894; b1824.
BAE76537; BAE76537; BAE76537.
GeneIDi946338.
KEGGiecj:JW1813.
eco:b1824.
PATRICifig|511145.12.peg.1901.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74894.1.
AP009048 Genomic DNA. Translation: BAE76537.1.
PIRiH64943.
RefSeqiNP_416338.1. NC_000913.3.
WP_001295496.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP64508.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259147. 8 interactors.
STRINGi511145.b1824.

Proteomic databases

PaxDbiP64508.
PRIDEiP64508.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74894; AAC74894; b1824.
BAE76537; BAE76537; BAE76537.
GeneIDi946338.
KEGGiecj:JW1813.
eco:b1824.
PATRICifig|511145.12.peg.1901.

Organism-specific databases

EchoBASEiEB4125.
EcoGeneiEG14382. yobF.

Phylogenomic databases

HOGENOMiHOG000009489.

Enzyme and pathway databases

BioCyciEcoCyc:G7000-MONOMER.

Miscellaneous databases

PROiPR:P64508.

Family and domain databases

InterProiView protein in InterPro
IPR019672. DUF2527.
PfamiView protein in Pfam
PF10736. DUF2527. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYOBF_ECOLI
AccessioniPrimary (citable) accession number: P64508
Secondary accession number(s): P76265, Q2MB19
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: June 7, 2017
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.