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Protein

Uncharacterized protein YeaR

Gene

yeaR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6983-MONOMER.
ECOL316407:JW1786-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YeaR
Gene namesi
Name:yeaR
Ordered Locus Names:b1797, JW1786
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13504. yeaR.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 119119Uncharacterized protein YeaRPRO_0000169028Add
BLAST

Proteomic databases

PaxDbiP64488.

Interactioni

Protein-protein interaction databases

BioGridi4259152. 15 interactions.
IntActiP64488. 7 interactions.
STRINGi511145.b1797.

Structurei

Secondary structure

1
119
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi9 – 135Combined sources
Turni19 – 213Combined sources
Helixi24 – 274Combined sources
Beta strandi28 – 303Combined sources
Beta strandi39 – 5719Combined sources
Beta strandi64 – 718Combined sources
Beta strandi73 – 764Combined sources
Beta strandi82 – 898Combined sources
Beta strandi93 – 1008Combined sources
Helixi102 – 1054Combined sources
Beta strandi106 – 1083Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3BB6X-ray2.30A/B/C/D1-119[»]
ProteinModelPortaliP64488.
SMRiP64488. Positions 1-113.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP64488.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108YS1. Bacteria.
COG3615. LUCA.
HOGENOMiHOG000269651.
InParanoidiP64488.
OMAiGAIRYYG.
OrthoDBiEOG6CP3Z2.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR015392. DUF1971.
IPR014710. RmlC-like_jellyroll.
IPR014510. Tellurite-R_YeaR.
[Graphical view]
PfamiPF09313. DUF1971. 1 hit.
[Graphical view]
PIRSFiPIRSF020632. YeaR. 1 hit.

Sequencei

Sequence statusi: Complete.

P64488-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLQIPQNYIH TRSTPFWNKQ TAPAGIFERH LDKGTRPGVY PRLSVMHGAV
60 70 80 90 100
KYLGYADEHS AEPDQVILIE AGQFAVFPPE KWHNIEAMTD DTYFNIDFFV
110
APEVLMEGAQ QRKVIHNGK
Length:119
Mass (Da):13,611
Last modified:October 11, 2004 - v1
Checksum:iF604B7C907AF686F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74867.1.
AP009048 Genomic DNA. Translation: BAE76533.1.
PIRiE64940.
RefSeqiNP_416311.1. NC_000913.3.
WP_000939317.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74867; AAC74867; b1797.
BAE76533; BAE76533; BAE76533.
GeneIDi946317.
KEGGiecj:JW1786.
eco:b1797.
PATRICi32118909. VBIEscCol129921_1872.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74867.1.
AP009048 Genomic DNA. Translation: BAE76533.1.
PIRiE64940.
RefSeqiNP_416311.1. NC_000913.3.
WP_000939317.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3BB6X-ray2.30A/B/C/D1-119[»]
ProteinModelPortaliP64488.
SMRiP64488. Positions 1-113.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259152. 15 interactions.
IntActiP64488. 7 interactions.
STRINGi511145.b1797.

Proteomic databases

PaxDbiP64488.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74867; AAC74867; b1797.
BAE76533; BAE76533; BAE76533.
GeneIDi946317.
KEGGiecj:JW1786.
eco:b1797.
PATRICi32118909. VBIEscCol129921_1872.

Organism-specific databases

EchoBASEiEB3277.
EcoGeneiEG13504. yeaR.

Phylogenomic databases

eggNOGiENOG4108YS1. Bacteria.
COG3615. LUCA.
HOGENOMiHOG000269651.
InParanoidiP64488.
OMAiGAIRYYG.
OrthoDBiEOG6CP3Z2.

Enzyme and pathway databases

BioCyciEcoCyc:G6983-MONOMER.
ECOL316407:JW1786-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP64488.
PROiP64488.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR015392. DUF1971.
IPR014710. RmlC-like_jellyroll.
IPR014510. Tellurite-R_YeaR.
[Graphical view]
PfamiPF09313. DUF1971. 1 hit.
[Graphical view]
PIRSFiPIRSF020632. YeaR. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYEAR_ECOLI
AccessioniPrimary (citable) accession number: P64488
Secondary accession number(s): P76248, Q2MB23
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: January 20, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.