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Protein

Uncharacterized lipoprotein YdcL

Gene

ydcL

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6742-MONOMER.
ECOL316407:JW1427-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein YdcL
Gene namesi
Name:ydcL
Ordered Locus Names:b1431, JW1427
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13755. ydcL.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20PROSITE-ProRule annotationAdd BLAST20
ChainiPRO_000001383621 – 222Uncharacterized lipoprotein YdcLAdd BLAST202

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi21N-palmitoyl cysteinePROSITE-ProRule annotation1
Lipidationi21S-diacylglycerol cysteinePROSITE-ProRule annotation1

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

EPDiP64451.
PaxDbiP64451.
PRIDEiP64451.

Interactioni

Protein-protein interaction databases

BioGridi4259563. 143 interactors.
DIPiDIP-47883N.
STRINGi511145.b1431.

Structurei

3D structure databases

ProteinModelPortaliP64451.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108KKZ. Bacteria.
ENOG410Z8VE. LUCA.
HOGENOMiHOG000120597.
OMAiMRWIDPK.

Family and domain databases

InterProiIPR021747. DUF3313.
[Graphical view]
PfamiPF11769. DUF3313. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P64451-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTTSFAKVA ALCGLLALSG CASKITQPDK YSGFLNNYSD LKETTSATGK
60 70 80 90 100
PVLRWVDPSF DQSKYDSIVW NPITYYPVPK PSTQVGQKVL DKILNYTNTE
110 120 130 140 150
MKEAIAQRKP LVTTAGPRSL IFRGAITGVD TSKEGLQFYE VVPVALVVAG
160 170 180 190 200
TQMATGHRTM DTRLYFEGEL IDAATNKPVI KVVRQGEGKD LNNESTPMAF
210 220
ENIKQVIDDM ATDATMFDVN KK
Length:222
Mass (Da):24,427
Last modified:October 11, 2004 - v1
Checksum:iC7E26EC64857B6FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74513.1.
AP009048 Genomic DNA. Translation: BAE76436.1.
PIRiB64895.
RefSeqiNP_415948.1. NC_000913.3.
WP_001261013.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74513; AAC74513; b1431.
BAE76436; BAE76436; BAE76436.
GeneIDi948203.
KEGGiecj:JW1427.
eco:b1431.
PATRICi32118148. VBIEscCol129921_1494.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74513.1.
AP009048 Genomic DNA. Translation: BAE76436.1.
PIRiB64895.
RefSeqiNP_415948.1. NC_000913.3.
WP_001261013.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP64451.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259563. 143 interactors.
DIPiDIP-47883N.
STRINGi511145.b1431.

Proteomic databases

EPDiP64451.
PaxDbiP64451.
PRIDEiP64451.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74513; AAC74513; b1431.
BAE76436; BAE76436; BAE76436.
GeneIDi948203.
KEGGiecj:JW1427.
eco:b1431.
PATRICi32118148. VBIEscCol129921_1494.

Organism-specific databases

EchoBASEiEB3518.
EcoGeneiEG13755. ydcL.

Phylogenomic databases

eggNOGiENOG4108KKZ. Bacteria.
ENOG410Z8VE. LUCA.
HOGENOMiHOG000120597.
OMAiMRWIDPK.

Enzyme and pathway databases

BioCyciEcoCyc:G6742-MONOMER.
ECOL316407:JW1427-MONOMER.

Miscellaneous databases

PROiP64451.

Family and domain databases

InterProiIPR021747. DUF3313.
[Graphical view]
PfamiPF11769. DUF3313. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYDCL_ECOLI
AccessioniPrimary (citable) accession number: P64451
Secondary accession number(s): P76101, Q2MBC0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: November 2, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.