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Protein

Uncharacterized protein YnaJ

Gene

ynaJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6668-MONOMER.
ECOL316407:JW1326-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YnaJ
Gene namesi
Name:ynaJ
Ordered Locus Names:b1332, JW1326
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14294. ynaJ.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei14 – 3421HelicalSequence analysisAdd
BLAST
Transmembranei60 – 8021HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8585Uncharacterized protein YnaJPRO_0000168916Add
BLAST

Proteomic databases

PaxDbiP64445.

Interactioni

Protein-protein interaction databases

BioGridi4259557. 113 interactions.
STRINGi511145.b1332.

Structurei

3D structure databases

ProteinModelPortaliP64445.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105S5I. Bacteria.
ENOG41120VM. LUCA.
HOGENOMiHOG000120120.
OMAiQSAMICV.
OrthoDBiEOG6JX7PN.

Family and domain databases

InterProiIPR019685. DUF2534.
[Graphical view]
PfamiPF10749. DUF2534. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P64445-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIMAKLKSAK GKKFLFGLLA VFIIAASVVT RATIGGVIEQ YNIPLSEWTT
60 70 80
SMYVIQSSMI FVYSLVFTVL LAIPLGIYFL GGEEQ
Length:85
Mass (Da):9,339
Last modified:October 11, 2004 - v1
Checksum:iBFFFACCDFCD17024
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74414.1.
AP009048 Genomic DNA. Translation: BAE76403.1.
PIRiG64882.
RefSeqiNP_415848.1. NC_000913.3.
WP_000605090.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74414; AAC74414; b1332.
BAE76403; BAE76403; BAE76403.
GeneIDi945901.
KEGGiecj:JW1326.
eco:b1332.
PATRICi32117940. VBIEscCol129921_1390.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74414.1.
AP009048 Genomic DNA. Translation: BAE76403.1.
PIRiG64882.
RefSeqiNP_415848.1. NC_000913.3.
WP_000605090.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP64445.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259557. 113 interactions.
STRINGi511145.b1332.

Proteomic databases

PaxDbiP64445.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74414; AAC74414; b1332.
BAE76403; BAE76403; BAE76403.
GeneIDi945901.
KEGGiecj:JW1326.
eco:b1332.
PATRICi32117940. VBIEscCol129921_1390.

Organism-specific databases

EchoBASEiEB4042.
EcoGeneiEG14294. ynaJ.

Phylogenomic databases

eggNOGiENOG4105S5I. Bacteria.
ENOG41120VM. LUCA.
HOGENOMiHOG000120120.
OMAiQSAMICV.
OrthoDBiEOG6JX7PN.

Enzyme and pathway databases

BioCyciEcoCyc:G6668-MONOMER.
ECOL316407:JW1326-MONOMER.

Miscellaneous databases

PROiP64445.

Family and domain databases

InterProiIPR019685. DUF2534.
[Graphical view]
PfamiPF10749. DUF2534. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYNAJ_ECOLI
AccessioniPrimary (citable) accession number: P64445
Secondary accession number(s): P76050, Q2MBF3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: April 13, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.