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Protein

Uncharacterized HIT-like protein HP_0404

Gene

HP_0404

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciHPY:HP0404-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HIT-like protein HP_0404
Gene namesi
Ordered Locus Names:HP_0404
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
Proteomesi
  • UP000000429 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001098181 – 104Uncharacterized HIT-like protein HP_0404Add BLAST104

Proteomic databases

PaxDbiP64382.

Interactioni

Protein-protein interaction databases

STRINGi85962.HP0404.

Structurei

Secondary structure

1104
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 8Combined sources6
Beta strandi16 – 19Combined sources4
Beta strandi21 – 27Combined sources7
Beta strandi32 – 43Combined sources12
Helixi48 – 50Combined sources3
Helixi53 – 69Combined sources17
Turni73 – 75Combined sources3
Beta strandi77 – 84Combined sources8
Helixi85 – 87Combined sources3
Beta strandi91 – 93Combined sources3
Beta strandi96 – 100Combined sources5

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4ZGLX-ray2.95A/B/C/D/E/F/G/H/I/J1-104[»]
ProteinModelPortaliP64382.
SMRiP64382.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 104HITPROSITE-ProRule annotationAdd BLAST102

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi93 – 97Histidine triad motif5

Sequence similaritiesi

Contains 1 HIT domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105K59. Bacteria.
COG0537. LUCA.
KOiK02503.
OMAiYRLITNN.

Family and domain databases

Gene3Di3.30.428.10. 1 hit.
InterProiIPR019808. Histidine_triad_CS.
IPR001310. Histidine_triad_HIT.
IPR011146. HIT-like.
[Graphical view]
PANTHERiPTHR23089. PTHR23089. 1 hit.
PfamiPF01230. HIT. 1 hit.
[Graphical view]
PRINTSiPR00332. HISTRIAD.
SUPFAMiSSF54197. SSF54197. 1 hit.
PROSITEiPS00892. HIT_1. 1 hit.
PS51084. HIT_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P64382-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVFEKIIQG EIPCSKILEN ERFLSFYDIN PKAKVHALVI PKQSIQDFNG
60 70 80 90 100
ITPELMAQMT SFIFEVVEKL GIKEKGYKLL TNVGKNAGQE VMHLHFHILS

GDKH
Length:104
Mass (Da):11,855
Last modified:October 11, 2004 - v1
Checksum:i00E6C9E47E3C3566
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07473.1.
PIRiD64570.
RefSeqiNP_207202.1. NC_000915.1.
WP_001100349.1. NC_018939.1.

Genome annotation databases

EnsemblBacteriaiAAD07473; AAD07473; HP_0404.
GeneIDi898890.
KEGGiheo:C694_02055.
hpy:HP0404.
PATRICi20592049. VBIHelPyl33062_0418.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07473.1.
PIRiD64570.
RefSeqiNP_207202.1. NC_000915.1.
WP_001100349.1. NC_018939.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4ZGLX-ray2.95A/B/C/D/E/F/G/H/I/J1-104[»]
ProteinModelPortaliP64382.
SMRiP64382.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi85962.HP0404.

Proteomic databases

PaxDbiP64382.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD07473; AAD07473; HP_0404.
GeneIDi898890.
KEGGiheo:C694_02055.
hpy:HP0404.
PATRICi20592049. VBIHelPyl33062_0418.

Phylogenomic databases

eggNOGiENOG4105K59. Bacteria.
COG0537. LUCA.
KOiK02503.
OMAiYRLITNN.

Enzyme and pathway databases

BioCyciHPY:HP0404-MONOMER.

Family and domain databases

Gene3Di3.30.428.10. 1 hit.
InterProiIPR019808. Histidine_triad_CS.
IPR001310. Histidine_triad_HIT.
IPR011146. HIT-like.
[Graphical view]
PANTHERiPTHR23089. PTHR23089. 1 hit.
PfamiPF01230. HIT. 1 hit.
[Graphical view]
PRINTSiPR00332. HISTRIAD.
SUPFAMiSSF54197. SSF54197. 1 hit.
PROSITEiPS00892. HIT_1. 1 hit.
PS51084. HIT_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYHIT_HELPY
AccessioniPrimary (citable) accession number: P64382
Secondary accession number(s): P56147
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: November 2, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.