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P63920

- DEFL_BRUSU

UniProt

P63920 - DEFL_BRUSU

Protein

Peptide deformylase-like

Gene

def

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (11 Oct 2004)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei134 – 1341By similarity

    GO - Molecular functioni

    1. iron ion binding Source: InterPro
    2. peptide deformylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Peptide deformylase-like
    Alternative name(s):
    Polypeptide deformylase-like
    Gene namesi
    Name:def
    Ordered Locus Names:BRA0454, BS1330_II0451
    OrganismiBrucella suis biovar 1 (strain 1330)
    Taxonomic identifieri204722 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000000824: Chromosome II, UP000007104: Chromosome II

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 164164Peptide deformylase-likePRO_0000082893Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi204722.BRA0454.

    Structurei

    3D structure databases

    ProteinModelPortaliP63920.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the polypeptide deformylase family.Curated

    Phylogenomic databases

    eggNOGiCOG0242.
    HOGENOMiHOG000243509.
    KOiK01462.
    OMAiNDPLILV.
    OrthoDBiEOG664CMF.

    Family and domain databases

    Gene3Di3.90.45.10. 1 hit.
    HAMAPiMF_00163. Pep_deformylase.
    InterProiIPR000181. Fmet_deformylase.
    IPR023635. Peptide_deformylase.
    [Graphical view]
    PANTHERiPTHR10458. PTHR10458. 1 hit.
    PfamiPF01327. Pep_deformylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF004749. Pep_def. 1 hit.
    PRINTSiPR01576. PDEFORMYLASE.
    SUPFAMiSSF56420. SSF56420. 1 hit.
    TIGRFAMsiTIGR00079. pept_deformyl. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P63920-1 [UniParc]FASTAAdd to Basket

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    MTVRLIVKYP DPRLRAAAEP VTTFDEGLRK LADDLLDTMR AAPGIGITAP    50
    HIGISKRVVV LELDRAAGPK IYINPEIVWA CEEKIRHQEG SVSMPGVVDE 100
    VERHARIRLR YQDLDGNEQT EESDGLLAVC HQHEIDQLDG IFWVQRLSRL 150
    RRERLIKRYE KLQR 164
    Length:164
    Mass (Da):18,857
    Last modified:October 11, 2004 - v1
    Checksum:iBA2B8C3F9C4E766C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014292 Genomic DNA. Translation: AAN33648.1.
    CP002998 Genomic DNA. Translation: AEM19927.1.
    RefSeqiNP_699643.1. NC_004311.2.
    YP_005614153.1. NC_017250.1.

    Genome annotation databases

    EnsemblBacteriaiAAN33648; AAN33648; BRA0454.
    AEM19927; AEM19927; BS1330_II0451.
    GeneIDi1164892.
    12139886.
    KEGGibms:BRA0454.
    bsi:BS1330_II0451.
    PATRICi17793713. VBIBruSui107850_2672.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014292 Genomic DNA. Translation: AAN33648.1 .
    CP002998 Genomic DNA. Translation: AEM19927.1 .
    RefSeqi NP_699643.1. NC_004311.2.
    YP_005614153.1. NC_017250.1.

    3D structure databases

    ProteinModelPortali P63920.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 204722.BRA0454.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAN33648 ; AAN33648 ; BRA0454 .
    AEM19927 ; AEM19927 ; BS1330_II0451 .
    GeneIDi 1164892.
    12139886.
    KEGGi bms:BRA0454.
    bsi:BS1330_II0451.
    PATRICi 17793713. VBIBruSui107850_2672.

    Phylogenomic databases

    eggNOGi COG0242.
    HOGENOMi HOG000243509.
    KOi K01462.
    OMAi NDPLILV.
    OrthoDBi EOG664CMF.

    Family and domain databases

    Gene3Di 3.90.45.10. 1 hit.
    HAMAPi MF_00163. Pep_deformylase.
    InterProi IPR000181. Fmet_deformylase.
    IPR023635. Peptide_deformylase.
    [Graphical view ]
    PANTHERi PTHR10458. PTHR10458. 1 hit.
    Pfami PF01327. Pep_deformylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF004749. Pep_def. 1 hit.
    PRINTSi PR01576. PDEFORMYLASE.
    SUPFAMi SSF56420. SSF56420. 1 hit.
    TIGRFAMsi TIGR00079. pept_deformyl. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1330.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1330.

    Entry informationi

    Entry nameiDEFL_BRUSU
    AccessioniPrimary (citable) accession number: P63920
    Secondary accession number(s): G0KCI9, Q8YBS4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 11, 2004
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Brucella suis
      Brucella suis (strain 1330): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3