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P63920

- DEFL_BRUSU

UniProt

P63920 - DEFL_BRUSU

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Protein
Peptide deformylase-like
Gene
def, BRA0454, BS1330_II0451
Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei134 – 1341 By similarity

GO - Molecular functioni

  1. iron ion binding Source: InterPro
  2. peptide deformylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Peptide deformylase-like
Alternative name(s):
Polypeptide deformylase-like
Gene namesi
Name:def
Ordered Locus Names:BRA0454, BS1330_II0451
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000824: Chromosome II, UP000007104: Chromosome II

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 164164Peptide deformylase-likeUniRule annotation
PRO_0000082893Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi204722.BRA0454.

Structurei

3D structure databases

ProteinModelPortaliP63920.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0242.
HOGENOMiHOG000243509.
KOiK01462.
OMAiNDPLILV.
OrthoDBiEOG664CMF.

Family and domain databases

Gene3Di3.90.45.10. 1 hit.
HAMAPiMF_00163. Pep_deformylase.
InterProiIPR000181. Fmet_deformylase.
IPR023635. Peptide_deformylase.
[Graphical view]
PANTHERiPTHR10458. PTHR10458. 1 hit.
PfamiPF01327. Pep_deformylase. 1 hit.
[Graphical view]
PIRSFiPIRSF004749. Pep_def. 1 hit.
PRINTSiPR01576. PDEFORMYLASE.
SUPFAMiSSF56420. SSF56420. 1 hit.
TIGRFAMsiTIGR00079. pept_deformyl. 1 hit.

Sequencei

Sequence statusi: Complete.

P63920-1 [UniParc]FASTAAdd to Basket

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MTVRLIVKYP DPRLRAAAEP VTTFDEGLRK LADDLLDTMR AAPGIGITAP    50
HIGISKRVVV LELDRAAGPK IYINPEIVWA CEEKIRHQEG SVSMPGVVDE 100
VERHARIRLR YQDLDGNEQT EESDGLLAVC HQHEIDQLDG IFWVQRLSRL 150
RRERLIKRYE KLQR 164
Length:164
Mass (Da):18,857
Last modified:October 11, 2004 - v1
Checksum:iBA2B8C3F9C4E766C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014292 Genomic DNA. Translation: AAN33648.1.
CP002998 Genomic DNA. Translation: AEM19927.1.
RefSeqiNP_699643.1. NC_004311.2.
YP_005614153.1. NC_017250.1.

Genome annotation databases

EnsemblBacteriaiAAN33648; AAN33648; BRA0454.
AEM19927; AEM19927; BS1330_II0451.
GeneIDi1164892.
12139886.
KEGGibms:BRA0454.
bsi:BS1330_II0451.
PATRICi17793713. VBIBruSui107850_2672.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014292 Genomic DNA. Translation: AAN33648.1 .
CP002998 Genomic DNA. Translation: AEM19927.1 .
RefSeqi NP_699643.1. NC_004311.2.
YP_005614153.1. NC_017250.1.

3D structure databases

ProteinModelPortali P63920.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 204722.BRA0454.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAN33648 ; AAN33648 ; BRA0454 .
AEM19927 ; AEM19927 ; BS1330_II0451 .
GeneIDi 1164892.
12139886.
KEGGi bms:BRA0454.
bsi:BS1330_II0451.
PATRICi 17793713. VBIBruSui107850_2672.

Phylogenomic databases

eggNOGi COG0242.
HOGENOMi HOG000243509.
KOi K01462.
OMAi NDPLILV.
OrthoDBi EOG664CMF.

Family and domain databases

Gene3Di 3.90.45.10. 1 hit.
HAMAPi MF_00163. Pep_deformylase.
InterProi IPR000181. Fmet_deformylase.
IPR023635. Peptide_deformylase.
[Graphical view ]
PANTHERi PTHR10458. PTHR10458. 1 hit.
Pfami PF01327. Pep_deformylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF004749. Pep_def. 1 hit.
PRINTSi PR01576. PDEFORMYLASE.
SUPFAMi SSF56420. SSF56420. 1 hit.
TIGRFAMsi TIGR00079. pept_deformyl. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.

Entry informationi

Entry nameiDEFL_BRUSU
AccessioniPrimary (citable) accession number: P63920
Secondary accession number(s): G0KCI9, Q8YBS4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: May 14, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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