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P63920

- DEFL_BRUSU

UniProt

P63920 - DEFL_BRUSU

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Protein

Peptide deformylase-like

Gene

def

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei134 – 1341By similarity

GO - Molecular functioni

  1. iron ion binding Source: InterPro
  2. peptide deformylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Peptide deformylase-like
Alternative name(s):
Polypeptide deformylase-like
Gene namesi
Name:def
Ordered Locus Names:BRA0454, BS1330_II0451
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000824: Chromosome II, UP000007104: Chromosome II

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 164164Peptide deformylase-likePRO_0000082893Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi204722.BRA0454.

Structurei

3D structure databases

ProteinModelPortaliP63920.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the polypeptide deformylase family.Curated

Phylogenomic databases

eggNOGiCOG0242.
HOGENOMiHOG000243509.
KOiK01462.
OMAiNDPLILV.
OrthoDBiEOG664CMF.

Family and domain databases

Gene3Di3.90.45.10. 1 hit.
HAMAPiMF_00163. Pep_deformylase.
InterProiIPR000181. Fmet_deformylase.
IPR023635. Peptide_deformylase.
[Graphical view]
PANTHERiPTHR10458. PTHR10458. 1 hit.
PfamiPF01327. Pep_deformylase. 1 hit.
[Graphical view]
PIRSFiPIRSF004749. Pep_def. 1 hit.
PRINTSiPR01576. PDEFORMYLASE.
SUPFAMiSSF56420. SSF56420. 1 hit.
TIGRFAMsiTIGR00079. pept_deformyl. 1 hit.

Sequencei

Sequence statusi: Complete.

P63920-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTVRLIVKYP DPRLRAAAEP VTTFDEGLRK LADDLLDTMR AAPGIGITAP
60 70 80 90 100
HIGISKRVVV LELDRAAGPK IYINPEIVWA CEEKIRHQEG SVSMPGVVDE
110 120 130 140 150
VERHARIRLR YQDLDGNEQT EESDGLLAVC HQHEIDQLDG IFWVQRLSRL
160
RRERLIKRYE KLQR
Length:164
Mass (Da):18,857
Last modified:October 11, 2004 - v1
Checksum:iBA2B8C3F9C4E766C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014292 Genomic DNA. Translation: AAN33648.1.
CP002998 Genomic DNA. Translation: AEM19927.1.
RefSeqiNP_699643.1. NC_004311.2.
YP_005614153.1. NC_017250.1.

Genome annotation databases

EnsemblBacteriaiAAN33648; AAN33648; BRA0454.
AEM19927; AEM19927; BS1330_II0451.
GeneIDi1164892.
12139886.
KEGGibms:BRA0454.
bsi:BS1330_II0451.
PATRICi17793713. VBIBruSui107850_2672.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014292 Genomic DNA. Translation: AAN33648.1 .
CP002998 Genomic DNA. Translation: AEM19927.1 .
RefSeqi NP_699643.1. NC_004311.2.
YP_005614153.1. NC_017250.1.

3D structure databases

ProteinModelPortali P63920.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 204722.BRA0454.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAN33648 ; AAN33648 ; BRA0454 .
AEM19927 ; AEM19927 ; BS1330_II0451 .
GeneIDi 1164892.
12139886.
KEGGi bms:BRA0454.
bsi:BS1330_II0451.
PATRICi 17793713. VBIBruSui107850_2672.

Phylogenomic databases

eggNOGi COG0242.
HOGENOMi HOG000243509.
KOi K01462.
OMAi NDPLILV.
OrthoDBi EOG664CMF.

Family and domain databases

Gene3Di 3.90.45.10. 1 hit.
HAMAPi MF_00163. Pep_deformylase.
InterProi IPR000181. Fmet_deformylase.
IPR023635. Peptide_deformylase.
[Graphical view ]
PANTHERi PTHR10458. PTHR10458. 1 hit.
Pfami PF01327. Pep_deformylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF004749. Pep_def. 1 hit.
PRINTSi PR01576. PDEFORMYLASE.
SUPFAMi SSF56420. SSF56420. 1 hit.
TIGRFAMsi TIGR00079. pept_deformyl. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.

Entry informationi

Entry nameiDEFL_BRUSU
AccessioniPrimary (citable) accession number: P63920
Secondary accession number(s): G0KCI9, Q8YBS4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: October 1, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3