P63642 (ASSY_MYCTU) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 65.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Argininosuccinate synthase EC=6.3.4.5 Alternative name(s): Citrulline--aspartate ligase | ||||||
| Gene names |
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| Organism | Mycobacterium tuberculosis [Reference proteome] [HAMAP] | ||||||
| Taxonomic identifier | 1773 [NCBI] | ||||||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium tuberculosis complex![]() |
Protein attributes
| Sequence length | 398 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + L-citrulline + L-aspartate = AMP + diphosphate + N(omega)-(L-arginino)succinate. HAMAP-Rule MF_00005 |
| Pathway | Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 2/3. HAMAP-Rule MF_00005 |
| Subunit structure | Homotetramer By similarity. |
| Subcellular location | Cytoplasm By similarity. |
| Sequence similarities | Belongs to the argininosuccinate synthase family. Type 1 subfamily. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Arginine biosynthesis |
| Cellular component | Cytoplasm |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Ligase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | arginine biosynthetic process Inferred from electronic annotation. Source: HAMAP growthInferred from mutant phenotype PubMed 12657046. Source: MTBBASE |
| Cellular_component | cytosol Inferred from direct assay PubMed 15525680. Source: MTBBASE plasma membraneInferred from direct assay PubMed 14532352PubMed 15525680. Source: MTBBASE |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: HAMAP argininosuccinate synthase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 398 | 398 | Argininosuccinate synthase HAMAP-Rule MF_00005 | PRO_0000148616 | |||||
Regions | |||||||||
| Nucleotide binding | 8 – 16 | 9 | ATP By similarity | ||||||
Sites | |||||||||
| Binding site | 87 | 1 | Citrulline By similarity | ||||||
| Binding site | 117 | 1 | ATP; via amide nitrogen By similarity | ||||||
| Binding site | 119 | 1 | Aspartate By similarity | ||||||
| Binding site | 123 | 1 | Aspartate By similarity | ||||||
| Binding site | 123 | 1 | Citrulline By similarity | ||||||
| Binding site | 124 | 1 | Aspartate By similarity | ||||||
| Binding site | 127 | 1 | Citrulline By similarity | ||||||
| Binding site | 175 | 1 | Citrulline By similarity | ||||||
| Binding site | 260 | 1 | Citrulline By similarity | ||||||
| Binding site | 272 | 1 | Citrulline By similarity | ||||||
Sequences
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References
| [1] | "Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence." Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M., Harris D.E., Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III, Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K. Barrell B.G.Nature 393:537-544(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25618 / H37Rv. |
| [2] | "Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains." Fleischmann R.D., Alland D., Eisen J.A., Carpenter L., White O., Peterson J.D., DeBoy R.T., Dodson R.J., Gwinn M.L., Haft D.H., Hickey E.K., Kolonay J.F., Nelson W.C., Umayam L.A., Ermolaeva M.D., Salzberg S.L., Delcher A., Utterback T.R. Fraser C.M.J. Bacteriol. 184:5479-5490(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CDC 1551 / Oshkosh. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BX842577 Genomic DNA. Translation: CAB06629.1. AE000516 Genomic DNA. Translation: AAK45965.1. AL123456 Genomic DNA. Translation: CCP44423.1. |
| PIR | E70621. |
| RefSeq | NP_216174.1. NC_000962.3. NP_336151.1. NC_002755.2. YP_006515049.1. NC_018143.1. |
3D structure databases | |
| ProteinModelPortal | P63642. |
| SMR | P63642. Positions 4-393. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 83332.Rv1658. |
Proteomic databases | |
| PRIDE | P63642. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | AAK45965; AAK45965; MT1696. |
| GeneID | 13316439. 885645. 924317. |
| KEGG | mtc:MT1696. mtu:Rv1658. mtv:RVBD_1658. |
| PATRIC | 18125490. VBIMycTub22151_1859. |
Organism-specific databases | |
| TubercuList | Rv1658. |
Phylogenomic databases | |
| eggNOG | COG0137. |
| HOGENOM | HOG000230093. |
| KO | K01940. |
| OMA | NDQFRFE. |
| ProtClustDB | PRK00509. |
Enzyme and pathway databases | |
| UniPathway | UPA00068; UER00113. |
Family and domain databases | |
| Gene3D | 3.40.50.620. 1 hit. 3.90.1260.10. 1 hit. |
| HAMAP | MF_00005. Arg_succ_synth_type1. |
| InterPro | IPR001518. Arginosuc_synth. IPR018223. Arginosuc_synth_CS. IPR023434. Arginosuc_synth_type_1_subfam. IPR024074. AS_cat/multimer_dom_body. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view] |
| PANTHER | PTHR11587. PTHR11587. 1 hit. |
| Pfam | PF00764. Arginosuc_synth. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00032. argG. 1 hit. |
| PROSITE | PS00564. ARGININOSUCCIN_SYN_1. 1 hit. PS00565. ARGININOSUCCIN_SYN_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | ASSY_MYCTU | ||||||||
| Accession | Primary (citable) accession number: P63642 Secondary accession number(s): L0TA96, P94993 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| Mycobacterium tuberculosis strains ATCC 25618 / H37Rv and CDC 1551 / Oshkosh Mycobacterium tuberculosis strains ATCC 25618 / H37Rv and CDC 1551 / Oshkosh: entries and gene names |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
