##gff-version 3 P62979 UniProtKB Chain 1 76 . . . ID=PRO_0000396477;Note=Ubiquitin P62979 UniProtKB Chain 77 156 . . . ID=PRO_0000396478;Note=Small ribosomal subunit protein eS31 P62979 UniProtKB Domain 1 76 . . . Note=Ubiquitin-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00214 P62979 UniProtKB Zinc finger 121 144 . . . Note=C4-type P62979 UniProtKB Region 76 95 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite P62979 UniProtKB Site 54 54 . . . Note=Interacts with activating enzyme P62979 UniProtKB Site 68 68 . . . Note=Essential for function P62979 UniProtKB Site 72 72 . . . Note=Interacts with activating enzyme P62979 UniProtKB Modified residue 65 65 . . . Note=Phosphoserine%3B by PINK1;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:24660806,ECO:0000269|PubMed:24751536,ECO:0000269|PubMed:24784582,ECO:0000269|PubMed:25527291;Dbxref=PMID:24660806,PMID:24751536,PMID:24784582,PMID:25527291 P62979 UniProtKB Modified residue 66 66 . . . Note=(Microbial infection) ADP-ribosylthreonine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:32330457;Dbxref=PMID:32330457 P62979 UniProtKB Modified residue 76 76 . . . Note=ADP-ribosylglycine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28525742;Dbxref=PMID:28525742 P62979 UniProtKB Modified residue 104 104 . . . Note=N6-acetyllysine;Ontology_term=ECO:0007744;evidence=ECO:0007744|PubMed:19608861;Dbxref=PMID:19608861 P62979 UniProtKB Modified residue 113 113 . . . Note=N6-acetyllysine;Ontology_term=ECO:0007744;evidence=ECO:0007744|PubMed:19608861;Dbxref=PMID:19608861 P62979 UniProtKB Modified residue 152 152 . . . Note=N6-acetyllysine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P62983 P62979 UniProtKB Cross-link 6 6 . . . Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin);Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:16443603;Dbxref=PMID:16443603 P62979 UniProtKB Cross-link 11 11 . . . Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin);Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16443603,ECO:0000269|PubMed:16543144;Dbxref=PMID:16443603,PMID:16543144 P62979 UniProtKB Cross-link 27 27 . . . Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin);Ontology_term=ECO:0000305;evidence=ECO:0000305|PubMed:15466860;Dbxref=PMID:15466860 P62979 UniProtKB Cross-link 29 29 . . . Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin);Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16543144,ECO:0000269|PubMed:25752573,ECO:0000269|PubMed:25752577,ECO:0000269|PubMed:34239127;Dbxref=PMID:16543144,PMID:25752573,PMID:25752577,PMID:34239127 P62979 UniProtKB Cross-link 33 33 . . . Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin);Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:25752577;Dbxref=PMID:25752577 P62979 UniProtKB Cross-link 48 48 . . . Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin);Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16443603,ECO:0000269|PubMed:16543144;Dbxref=PMID:16443603,PMID:16543144 P62979 UniProtKB Cross-link 63 63 . . . Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin);Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16543144,ECO:0000269|PubMed:18719106;Dbxref=PMID:16543144,PMID:18719106 P62979 UniProtKB Cross-link 76 76 . . . Note=Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) P62979 UniProtKB Cross-link 107 107 . . . Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin);Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:36638793;Dbxref=PMID:36638793 P62979 UniProtKB Cross-link 113 113 . . . Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin);Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:32129764,ECO:0000269|PubMed:36638793;Dbxref=PMID:32129764,PMID:36638793 P62979 UniProtKB Mutagenesis 48 48 . . . Note=No effect on HLTF-mediated polyubiquitination of PCNA. K->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:18719106;Dbxref=PMID:18719106 P62979 UniProtKB Mutagenesis 63 63 . . . Note=Abolishes HLTF-mediated polyubiquitination of PCNA. K->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:18719106;Dbxref=PMID:18719106 P62979 UniProtKB Mutagenesis 65 65 . . . Note=Prevents phosphorylation in case of mitophagy. Impaired translocation of PRKN to mitochondria. S->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:24660806,ECO:0000269|PubMed:24784582,ECO:0000269|PubMed:25474007;Dbxref=PMID:24660806,PMID:24784582,PMID:25474007 P62979 UniProtKB Mutagenesis 65 65 . . . Note=Phosphomimetic mutant that binds and activates PRKN. S->D;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24751536;Dbxref=PMID:24751536 P62979 UniProtKB Mutagenesis 65 65 . . . Note=Phosphomimetic mutant that can recruit PRKN to mitochondria. S->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:25474007;Dbxref=PMID:25474007 P62979 UniProtKB Mutagenesis 68 68 . . . Note=Loss of DTX3L-mediated polyubiquitination of histone H3 and H4. H->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28525742;Dbxref=PMID:28525742 P62979 UniProtKB Mutagenesis 72 72 . . . Note=No effect on ADP-ribosylation. R->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28525742;Dbxref=PMID:28525742 P62979 UniProtKB Mutagenesis 72 72 . . . Note=No effect on ADP-ribosylation%2C when associated with K-74. R->K;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28525742;Dbxref=PMID:28525742 P62979 UniProtKB Mutagenesis 74 74 . . . Note=No effect on ADP-ribosylation. R->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28525742;Dbxref=PMID:28525742 P62979 UniProtKB Mutagenesis 74 74 . . . Note=No effect on ADP-ribosylation%2C when associated with K-72. R->K;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28525742;Dbxref=PMID:28525742 P62979 UniProtKB Mutagenesis 76 76 . . . Note=Loss of ADP-ribosylation. G->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28525742;Dbxref=PMID:28525742 P62979 UniProtKB Mutagenesis 107 107 . . . Note=Abolished monoubiquitination by RNF25%2C leading to impaired ability to rescue stalled ribosomes%3B when associated with R-113. K->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:36638793;Dbxref=PMID:36638793 P62979 UniProtKB Mutagenesis 113 113 . . . Note=Abolished monoubiquitination by RNF25%2C leading to impaired ability to rescue stalled ribosomes%3B when associated with R-107. Abolished deubiquitination by USP16%2C without affecting maturation of the 40S ribosomal complex. K->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:32129764,ECO:0000269|PubMed:36638793;Dbxref=PMID:32129764,PMID:36638793 P62979 UniProtKB Beta strand 2 6 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3NHE P62979 UniProtKB Beta strand 8 10 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3NHE P62979 UniProtKB Beta strand 12 16 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3NHE P62979 UniProtKB Helix 23 34 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3NHE P62979 UniProtKB Helix 38 40 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3NHE P62979 UniProtKB Beta strand 42 45 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3NHE P62979 UniProtKB Beta strand 54 56 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6SQS P62979 UniProtKB Helix 57 59 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3NHE P62979 UniProtKB Beta strand 66 70 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:3NHE P62979 UniProtKB Helix 83 85 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:8T4S P62979 UniProtKB Beta strand 86 88 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6ZOJ P62979 UniProtKB Turn 99 104 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:7R4X P62979 UniProtKB Beta strand 106 108 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6ZLW P62979 UniProtKB Beta strand 109 112 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:8T4S P62979 UniProtKB Beta strand 116 118 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:7R4X P62979 UniProtKB Beta strand 123 125 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:7R4X P62979 UniProtKB Beta strand 127 129 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6ZLW P62979 UniProtKB Beta strand 131 134 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:7R4X P62979 UniProtKB Beta strand 139 141 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:7R4X P62979 UniProtKB Turn 142 144 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:7R4X P62979 UniProtKB Beta strand 146 148 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6ZXH