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P62907

- RL10A_RAT

UniProt

P62907 - RL10A_RAT

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Protein
60S ribosomal protein L10a
Gene
Rpl10a
Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L10a
Gene namesi
Name:Rpl10a
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 20

Organism-specific databases

RGDi620497. Rpl10a.

Subcellular locationi

GO - Cellular componenti

  1. cytosolic large ribosomal subunit Source: ProtInc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 21721660S ribosomal protein L10a
PRO_0000125822Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei11 – 111Phosphotyrosine By similarity
Modified residuei91 – 911N6-acetyllysine By similarity
Modified residuei106 – 1061N6-acetyllysine By similarity
Modified residuei118 – 1181N6-acetyllysine By similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiP62907.
PRIDEiP62907.

PTM databases

PhosphoSiteiP62907.

Expressioni

Gene expression databases

GenevestigatoriP62907.

Interactioni

Protein-protein interaction databases

IntActiP62907. 1 interaction.
MINTiMINT-4576640.
STRINGi10116.ENSRNOP00000000603.

Structurei

3D structure databases

ProteinModelPortaliP62907.
SMRiP62907. Positions 1-217.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0081.
GeneTreeiENSGT00390000008767.
HOGENOMiHOG000207014.
HOVERGENiHBG055239.
InParanoidiP62907.
KOiK02865.
OMAiIDRAKHG.
OrthoDBiEOG7S7SG8.
PhylomeDBiP62907.
TreeFamiTF300791.

Family and domain databases

Gene3Di3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProiIPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamiPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMiSSF56808. SSF56808. 1 hit.
PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62907-1 [UniParc]FASTAAdd to Basket

« Hide

MSSKVSRDTL YEAVREVLHG NQRKRRKFLE TVELQISLKN YDPQKDKRFS    50
GTVRLKSTPR PKFSVCVLGD QQHCDEAKAV DIPHMDIEAL KKLNKNKKLV 100
KKLAKKYDAF LASESLIKQI PRILGPGLNK AGKFPSLLTH NENMVAKVDE 150
VKSTIKFQMK KVLCLAVAVG HVKMTDDELV YNIHLAVNFL VSLLKKNWQN 200
VRALYIKSTM GKPQRLY 217
Length:217
Mass (Da):24,831
Last modified:January 23, 2007 - v2
Checksum:i38F1A31119A751D3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X93352 mRNA. Translation: CAA63732.1.
BC058468 mRNA. Translation: AAH58468.1.
PIRiJC4677.
RefSeqiNP_112327.1. NM_031065.1.
UniGeneiRn.161731.
Rn.2262.

Genome annotation databases

EnsembliENSRNOT00000000603; ENSRNOP00000000603; ENSRNOG00000000505.
GeneIDi81729.
KEGGirno:81729.
UCSCiRGD:620497. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X93352 mRNA. Translation: CAA63732.1 .
BC058468 mRNA. Translation: AAH58468.1 .
PIRi JC4677.
RefSeqi NP_112327.1. NM_031065.1.
UniGenei Rn.161731.
Rn.2262.

3D structure databases

ProteinModelPortali P62907.
SMRi P62907. Positions 1-217.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P62907. 1 interaction.
MINTi MINT-4576640.
STRINGi 10116.ENSRNOP00000000603.

PTM databases

PhosphoSitei P62907.

Proteomic databases

PaxDbi P62907.
PRIDEi P62907.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000000603 ; ENSRNOP00000000603 ; ENSRNOG00000000505 .
GeneIDi 81729.
KEGGi rno:81729.
UCSCi RGD:620497. rat.

Organism-specific databases

CTDi 4736.
RGDi 620497. Rpl10a.

Phylogenomic databases

eggNOGi COG0081.
GeneTreei ENSGT00390000008767.
HOGENOMi HOG000207014.
HOVERGENi HBG055239.
InParanoidi P62907.
KOi K02865.
OMAi IDRAKHG.
OrthoDBi EOG7S7SG8.
PhylomeDBi P62907.
TreeFami TF300791.

Miscellaneous databases

NextBioi 18266.
PROi P62907.

Gene expression databases

Genevestigatori P62907.

Family and domain databases

Gene3Di 3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProi IPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view ]
Pfami PF00687. Ribosomal_L1. 1 hit.
[Graphical view ]
PIRSFi PIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMi SSF56808. SSF56808. 1 hit.
PROSITEi PS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The primary structure of rat ribosomal protein L10a."
    Olvera J., Wool I.G.
    Biochem. Biophys. Res. Commun. 220:954-957(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 199-213.
    Strain: Sprague-Dawley.
    Tissue: Liver.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Pituitary.

Entry informationi

Entry nameiRL10A_RAT
AccessioniPrimary (citable) accession number: P62907
Secondary accession number(s): P52859, P53025
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 31, 2004
Last sequence update: January 23, 2007
Last modified: May 14, 2014
This is version 80 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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