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P62907 (RL10A_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
60S ribosomal protein L10a
Gene names
Name:Rpl10a
OrganismRattus norvegicus (Rat) [Reference proteome]
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length217 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L1P family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 21721660S ribosomal protein L10a
PRO_0000125822

Amino acid modifications

Modified residue111Phosphotyrosine By similarity
Modified residue911N6-acetyllysine By similarity
Modified residue1061N6-acetyllysine By similarity
Modified residue1181N6-acetyllysine By similarity

Sequences

Sequence LengthMass (Da)Tools
P62907 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 38F1A31119A751D3

FASTA21724,831
        10         20         30         40         50         60 
MSSKVSRDTL YEAVREVLHG NQRKRRKFLE TVELQISLKN YDPQKDKRFS GTVRLKSTPR 

        70         80         90        100        110        120 
PKFSVCVLGD QQHCDEAKAV DIPHMDIEAL KKLNKNKKLV KKLAKKYDAF LASESLIKQI 

       130        140        150        160        170        180 
PRILGPGLNK AGKFPSLLTH NENMVAKVDE VKSTIKFQMK KVLCLAVAVG HVKMTDDELV 

       190        200        210 
YNIHLAVNFL VSLLKKNWQN VRALYIKSTM GKPQRLY 

« Hide

References

« Hide 'large scale' references
[1]"The primary structure of rat ribosomal protein L10a."
Olvera J., Wool I.G.
Biochem. Biophys. Res. Commun. 220:954-957(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 199-213.
Strain: Sprague-Dawley.
Tissue: Liver.
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Pituitary.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X93352 mRNA. Translation: CAA63732.1.
BC058468 mRNA. Translation: AAH58468.1.
PIRJC4677.
RefSeqNP_112327.1. NM_031065.1.
UniGeneRn.161731.
Rn.2262.

3D structure databases

ProteinModelPortalP62907.
SMRP62907. Positions 1-217.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP62907. 1 interaction.
MINTMINT-4576640.
STRING10116.ENSRNOP00000000603.

PTM databases

PhosphoSiteP62907.

Proteomic databases

PaxDbP62907.
PRIDEP62907.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000000603; ENSRNOP00000000603; ENSRNOG00000000505.
GeneID81729.
KEGGrno:81729.
UCSCRGD:620497. rat.

Organism-specific databases

CTD4736.
RGD620497. Rpl10a.

Phylogenomic databases

eggNOGCOG0081.
GeneTreeENSGT00390000008767.
HOGENOMHOG000207014.
HOVERGENHBG055239.
InParanoidP62907.
KOK02865.
OMAIDRAKHG.
OrthoDBEOG7S7SG8.
PhylomeDBP62907.
TreeFamTF300791.

Gene expression databases

GenevestigatorP62907.

Family and domain databases

Gene3D3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProIPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMSSF56808. SSF56808. 1 hit.
PROSITEPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio18266.
PROP62907.

Entry information

Entry nameRL10A_RAT
AccessionPrimary (citable) accession number: P62907
Secondary accession number(s): P52859, P53025
Entry history
Integrated into UniProtKB/Swiss-Prot: August 31, 2004
Last sequence update: January 23, 2007
Last modified: May 14, 2014
This is version 80 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries