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Protein

60S ribosomal protein L30

Gene

Rpl30

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

  • cytoplasmic translation Source: GO_Central
  • liver regeneration Source: RGD
  • positive regulation of selenocysteine incorporation Source: RGD
  • selenocysteine metabolic process Source: Reactome

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-RNO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-RNO-2408557. Selenocysteine synthesis.
R-RNO-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-RNO-72689. Formation of a pool of free 40S subunits.
R-RNO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-RNO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-RNO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L30
Gene namesi
Name:Rpl30
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componentsi: Chromosome 10, Chromosome 7

Organism-specific databases

RGDi621201. Rpl30.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001461231 – 11560S ribosomal protein L30Add BLAST115

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei10PhosphoserineBy similarity1
Modified residuei16PhosphoserineBy similarity1
Modified residuei26N6-acetyllysine; alternateBy similarity1
Cross-linki26Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternateBy similarity

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiP62890.
PRIDEiP62890.

PTM databases

iPTMnetiP62890.
PhosphoSitePlusiP62890.

Expressioni

Gene expression databases

BgeeiENSRNOG00000005975.
GenevisibleiP62890. RN.

Interactioni

Protein-protein interaction databases

BioGridi249178. 3 interactors.
IntActiP62890. 2 interactors.
MINTiMINT-1858335.
STRINGi10116.ENSRNOP00000054398.

Structurei

3D structure databases

ProteinModelPortaliP62890.
SMRiP62890.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG2988. Eukaryota.
COG1911. LUCA.
GeneTreeiENSGT00390000012138.
HOGENOMiHOG000055224.
HOVERGENiHBG000449.
InParanoidiP62890.
KOiK02908.
OMAiYEFEGTS.
OrthoDBiEOG091G0W6G.
PhylomeDBiP62890.
TreeFamiTF300252.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
HAMAPiMF_00481. Ribosomal_L30e. 1 hit.
InterProiView protein in InterPro
IPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
PANTHERiPTHR11449:SF5. PTHR11449:SF5. 1 hit.
PfamiView protein in Pfam
PF01248. Ribosomal_L7Ae. 1 hit.
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiView protein in PROSITE
PS00709. RIBOSOMAL_L30E_1. 1 hit.
PS00993. RIBOSOMAL_L30E_2. 1 hit.

Sequencei

Sequence statusi: Complete.

P62890-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVAAKKTKKS LESINSRLQL VMKSGKYVLG YKQTLKMIRQ GKAKLVILAN
60 70 80 90 100
NCPALRKSEI EYYAMLAKTG VHHYSGNNIE LGTACGKYYR VCTLAIIDPG
110
DSDIIRSMPE QTGEK
Length:115
Mass (Da):12,784
Last modified:January 23, 2007 - v2
Checksum:i95186B081E39748C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02932 mRNA. Translation: AAA42072.1.
BC058471 mRNA. Translation: AAH58471.1.
PIRiB24028. R6RT30.
RefSeqiNP_073190.1. NM_022699.3.
XP_002727755.1. XM_002727709.4.
XP_003752376.1. XM_003752328.4.
UniGeneiRn.161950.
Rn.3359.
Rn.36878.

Genome annotation databases

EnsembliENSRNOT00000042688; ENSRNOP00000072453; ENSRNOG00000032825.
ENSRNOT00000057587; ENSRNOP00000054398; ENSRNOG00000005975.
GeneIDi100362027.
64640.
KEGGirno:100362027.
rno:64640.
UCSCiRGD:621201. rat.

Similar proteinsi

Entry informationi

Entry nameiRL30_RAT
AccessioniPrimary (citable) accession number: P62890
Secondary accession number(s): P04645
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 13, 1987
Last sequence update: January 23, 2007
Last modified: September 27, 2017
This is version 112 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families