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Protein

60S ribosomal protein L30

Gene

Rpl30

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

  • liver regeneration Source: RGD
  • positive regulation of selenocysteine incorporation Source: RGD
  • selenocysteine metabolic process Source: Reactome
  • translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-RNO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-RNO-2408557. Selenocysteine synthesis.
R-RNO-6791226. Major pathway of rRNA processing in the nucleolus.
R-RNO-72689. Formation of a pool of free 40S subunits.
R-RNO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-RNO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-RNO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L30
Gene namesi
Name:Rpl30
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componentsi: Chromosome 10, Chromosome 7

Organism-specific databases

RGDi621201. Rpl30.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: Reactome
  • cytosolic large ribosomal subunit Source: RGD
  • extracellular exosome Source: Ensembl
  • focal adhesion Source: Ensembl
  • membrane Source: Ensembl
  • nucleus Source: Ensembl
  • ribosome Source: RGD
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11511560S ribosomal protein L30PRO_0000146123Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei10 – 101PhosphoserineBy similarity
Modified residuei26 – 261N6-acetyllysineBy similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiP62890.
PRIDEiP62890.

PTM databases

iPTMnetiP62890.

Expressioni

Gene expression databases

GenevisibleiP62890. RN.

Interactioni

Protein-protein interaction databases

BioGridi249178. 2 interactions.
IntActiP62890. 2 interactions.
MINTiMINT-1858335.
STRINGi10116.ENSRNOP00000054398.

Structurei

3D structure databases

ProteinModelPortaliP62890.
SMRiP62890. Positions 9-105.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L30e family.Curated

Phylogenomic databases

eggNOGiKOG2988. Eukaryota.
COG1911. LUCA.
GeneTreeiENSGT00390000012138.
HOGENOMiHOG000055224.
HOVERGENiHBG000449.
InParanoidiP62890.
KOiK02908.
OMAiNIPVYQH.
OrthoDBiEOG70CR8V.
PhylomeDBiP62890.
TreeFamiTF300252.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
HAMAPiMF_00481. Ribosomal_L30e.
InterProiIPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiPS00709. RIBOSOMAL_L30E_1. 1 hit.
PS00993. RIBOSOMAL_L30E_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P62890-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVAAKKTKKS LESINSRLQL VMKSGKYVLG YKQTLKMIRQ GKAKLVILAN
60 70 80 90 100
NCPALRKSEI EYYAMLAKTG VHHYSGNNIE LGTACGKYYR VCTLAIIDPG
110
DSDIIRSMPE QTGEK
Length:115
Mass (Da):12,784
Last modified:January 23, 2007 - v2
Checksum:i95186B081E39748C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02932 mRNA. Translation: AAA42072.1.
BC058471 mRNA. Translation: AAH58471.1.
PIRiB24028. R6RT30.
RefSeqiNP_073190.1. NM_022699.3.
XP_002727755.1. XM_002727709.3.
XP_003752376.1. XM_003752328.3.
UniGeneiRn.161950.
Rn.3359.
Rn.36878.

Genome annotation databases

EnsembliENSRNOT00000042688; ENSRNOP00000072453; ENSRNOG00000032825.
ENSRNOT00000057587; ENSRNOP00000054398; ENSRNOG00000005975.
GeneIDi100362027.
64640.
KEGGirno:100362027.
rno:64640.
UCSCiRGD:621201. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02932 mRNA. Translation: AAA42072.1.
BC058471 mRNA. Translation: AAH58471.1.
PIRiB24028. R6RT30.
RefSeqiNP_073190.1. NM_022699.3.
XP_002727755.1. XM_002727709.3.
XP_003752376.1. XM_003752328.3.
UniGeneiRn.161950.
Rn.3359.
Rn.36878.

3D structure databases

ProteinModelPortaliP62890.
SMRiP62890. Positions 9-105.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi249178. 2 interactions.
IntActiP62890. 2 interactions.
MINTiMINT-1858335.
STRINGi10116.ENSRNOP00000054398.

PTM databases

iPTMnetiP62890.

Proteomic databases

PaxDbiP62890.
PRIDEiP62890.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000042688; ENSRNOP00000072453; ENSRNOG00000032825.
ENSRNOT00000057587; ENSRNOP00000054398; ENSRNOG00000005975.
GeneIDi100362027.
64640.
KEGGirno:100362027.
rno:64640.
UCSCiRGD:621201. rat.

Organism-specific databases

CTDi6156.
RGDi621201. Rpl30.

Phylogenomic databases

eggNOGiKOG2988. Eukaryota.
COG1911. LUCA.
GeneTreeiENSGT00390000012138.
HOGENOMiHOG000055224.
HOVERGENiHBG000449.
InParanoidiP62890.
KOiK02908.
OMAiNIPVYQH.
OrthoDBiEOG70CR8V.
PhylomeDBiP62890.
TreeFamiTF300252.

Enzyme and pathway databases

ReactomeiR-RNO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-RNO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-RNO-2408557. Selenocysteine synthesis.
R-RNO-6791226. Major pathway of rRNA processing in the nucleolus.
R-RNO-72689. Formation of a pool of free 40S subunits.
R-RNO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-RNO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-RNO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiP62890.

Gene expression databases

GenevisibleiP62890. RN.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
HAMAPiMF_00481. Ribosomal_L30e.
InterProiIPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiPS00709. RIBOSOMAL_L30E_1. 1 hit.
PS00993. RIBOSOMAL_L30E_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning and nucleotide sequences of cDNAs specific for rat liver ribosomal proteins S17 and L30."
    Nakanishi O., Oyanagi M., Kuwano Y., Tanaka T., Nakayama T., Mitsui H., Nabeshima Y., Ogata K.
    Gene 35:289-296(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Pituitary.

Entry informationi

Entry nameiRL30_RAT
AccessioniPrimary (citable) accession number: P62890
Secondary accession number(s): P04645
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 13, 1987
Last sequence update: January 23, 2007
Last modified: June 8, 2016
This is version 99 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.