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Protein

60S ribosomal protein L30

Gene

Rpl30

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-MMU-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-MMU-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-MMU-72689. Formation of a pool of free 40S subunits.
R-MMU-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-MMU-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-MMU-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L30
Gene namesi
Name:Rpl30
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:98037. Rpl30.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001461221 – 11560S ribosomal protein L30Add BLAST115

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei10PhosphoserineBy similarity1
Modified residuei16PhosphoserineBy similarity1
Modified residuei26N6-acetyllysine; alternateBy similarity1
Cross-linki26Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternateBy similarity

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

EPDiP62889.
PaxDbiP62889.
PeptideAtlasiP62889.
PRIDEiP62889.

PTM databases

iPTMnetiP62889.
PhosphoSitePlusiP62889.
SwissPalmiP62889.

Expressioni

Gene expression databases

BgeeiENSMUSG00000058600.
CleanExiMM_RPL30.
ExpressionAtlasiP62889. baseline and differential.
GenevisibleiP62889. MM.

Interactioni

Protein-protein interaction databases

BioGridi202978. 5 interactors.
IntActiP62889. 5 interactors.
MINTiMINT-1858324.
STRINGi10090.ENSMUSP00000009039.

Structurei

3D structure databases

ProteinModelPortaliP62889.
SMRiP62889.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG2988. Eukaryota.
COG1911. LUCA.
GeneTreeiENSGT00390000012138.
HOGENOMiHOG000055224.
HOVERGENiHBG000449.
InParanoidiP62889.
KOiK02908.
OMAiYEFEGTS.
OrthoDBiEOG091G0W6G.
PhylomeDBiP62889.
TreeFamiTF300252.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
HAMAPiMF_00481. Ribosomal_L30e. 1 hit.
InterProiView protein in InterPro
IPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
PANTHERiPTHR11449:SF1. PTHR11449:SF1. 1 hit.
PfamiView protein in Pfam
PF01248. Ribosomal_L7Ae. 1 hit.
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiView protein in PROSITE
PS00709. RIBOSOMAL_L30E_1. 1 hit.
PS00993. RIBOSOMAL_L30E_2. 1 hit.

Sequencei

Sequence statusi: Complete.

P62889-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVAAKKTKKS LESINSRLQL VMKSGKYVLG YKQTLKMIRQ GKAKLVILAN
60 70 80 90 100
NCPALRKSEI EYYAMLAKTG VHHYSGNNIE LGTACGKYYR VCTLAIIDPG
110
DSDIIRSMPE QTGEK
Length:115
Mass (Da):12,784
Last modified:January 23, 2007 - v2
Checksum:i95186B081E39748C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02928 Unassigned DNA. Translation: AAA03645.1.
AK002988 mRNA. Translation: BAB22500.1.
BC002060 mRNA. Translation: AAH02060.1.
BC086890 mRNA. Translation: AAH86890.1.
CCDSiCCDS37057.1.
PIRiS11622. R6MS30.
RefSeqiNP_001156957.1. NM_001163485.1.
NP_033109.1. NM_009083.4.
UniGeneiMm.358632.
Mm.439801.

Genome annotation databases

EnsembliENSMUST00000009039; ENSMUSP00000009039; ENSMUSG00000058600.
ENSMUST00000079735; ENSMUSP00000106014; ENSMUSG00000058600.
GeneIDi19946.
KEGGimmu:19946.
UCSCiuc007vlq.2. mouse.

Similar proteinsi

Entry informationi

Entry nameiRL30_MOUSE
AccessioniPrimary (citable) accession number: P62889
Secondary accession number(s): P04645
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 13, 1987
Last sequence update: January 23, 2007
Last modified: October 25, 2017
This is version 128 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families