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P62871

- GBB1_BOVIN

UniProt

P62871 - GBB1_BOVIN

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Protein

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Gene
GNB1
Organism
Bos taurus (Bovine)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

GO - Molecular functioni

  1. GTPase activity Source: Ensembl
  2. protein binding Source: IntAct
  3. signal transducer activity Source: UniProtKB-KW

GO - Biological processi

  1. adenylate cyclase-activating dopamine receptor signaling pathway Source: BHF-UCL
  2. cell proliferation Source: Ensembl
  3. cellular response to catecholamine stimulus Source: BHF-UCL
  4. cellular response to prostaglandin E stimulus Source: BHF-UCL
  5. phospholipase C-activating G-protein coupled receptor signaling pathway Source: Ensembl
  6. retina development in camera-type eye Source: Ensembl
  7. sensory perception of taste Source: Ensembl
Complete GO annotation...

Keywords - Molecular functioni

Transducer

Enzyme and pathway databases

ReactomeiREACT_202137. Regulation of water balance by renal Aquaporins.
REACT_202218. G beta:gamma signalling through PI3Kgamma.
REACT_205384. G alpha (12/13) signalling events.
REACT_206547. G alpha (s) signalling events.
REACT_208538. Activation of G protein gated Potassium channels.
REACT_209033. G alpha (z) signalling events.
REACT_209198. Inactivation, recovery and regulation of the phototransduction cascade.
REACT_209521. G alpha (q) signalling events.
REACT_209727. Ca2+ pathway.
REACT_210152. Thromboxane signalling through TP receptor.
REACT_210568. G alpha (i) signalling events.
REACT_211545. ADP signalling through P2Y purinoceptor 1.
REACT_211562. Activation of the phototransduction cascade.
REACT_215840. Olfactory Signaling Pathway.
REACT_215912. Thrombin signalling through proteinase activated receptors (PARs).
REACT_217228. Presynaptic function of Kainate receptors.
REACT_217846. Glucagon-like Peptide-1 (GLP1) regulates insulin secretion.
REACT_218219. Adrenaline,noradrenaline inhibits insulin secretion.
REACT_219437. Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits.
REACT_219794. ADP signalling through P2Y purinoceptor 12.
REACT_220607. Glucagon-type ligand receptors.
REACT_221707. Glucagon signaling in metabolic regulation.
REACT_222419. G-protein activation.
REACT_224596. G beta:gamma signalling through PLC beta.
REACT_227415. Prostacyclin signalling through prostacyclin receptor.

Names & Taxonomyi

Protein namesi
Recommended name:
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Alternative name(s):
Transducin beta chain 1
Gene namesi
Name:GNB1
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
ProteomesiUP000009136: Chromosome 16

Subcellular locationi

GO - Cellular componenti

  1. heterotrimeric G-protein complex Source: BHF-UCL
  2. intracellular Source: BHF-UCL
  3. lysosomal membrane Source: Ensembl
  4. membrane Source: BHF-UCL
  5. photoreceptor disc membrane Source: Reactome
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 340339Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1PRO_0000127684Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylserine By similarity
Modified residuei266 – 2661Phosphohistidine1 Publication

Post-translational modificationi

Phosphorylation at His-266 by NDKB contributes to G protein activation by increasing the high energetic phosphate transfer onto GDP.

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiP62871.
PRIDEiP62871.

Interactioni

Subunit structurei

G proteins are composed of 3 units, alpha, beta and gamma. Interacts with ARHGEF18 and RASD2. The heterodimer formed by GNB1 and GNG2 interacts with PTH1R (via C-terminus) By similarity.

Binary interactionsi

WithEntry#Exp.IntActNotes
NME2Q3T0Q43EBI-357141,EBI-8577979

Protein-protein interaction databases

BioGridi158560. 5 interactions.
DIPiDIP-29227N.
IntActiP62871. 5 interactions.
MINTiMINT-1864875.

Structurei

Secondary structure

1
340
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi3 – 2422
Helixi30 – 334
Turni34 – 363
Beta strandi47 – 515
Beta strandi58 – 636
Beta strandi67 – 748
Turni75 – 773
Beta strandi78 – 836
Turni84 – 863
Beta strandi89 – 946
Beta strandi96 – 983
Beta strandi100 – 1056
Beta strandi109 – 1168
Beta strandi120 – 1256
Turni126 – 1283
Beta strandi130 – 1323
Beta strandi134 – 1407
Beta strandi146 – 1538
Beta strandi156 – 1616
Beta strandi166 – 1705
Turni171 – 1744
Beta strandi175 – 1806
Beta strandi187 – 1926
Beta strandi196 – 2038
Beta strandi208 – 2125
Turni213 – 2153
Beta strandi217 – 2226
Beta strandi229 – 2346
Beta strandi238 – 2458
Beta strandi250 – 2545
Turni255 – 2584
Beta strandi259 – 2646
Beta strandi273 – 2786
Beta strandi282 – 2898
Beta strandi292 – 2987
Turni299 – 3013
Beta strandi304 – 3096
Beta strandi315 – 3206
Beta strandi327 – 3315
Beta strandi336 – 3394

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1A0RX-ray2.80B2-340[»]
1B9XX-ray3.00A1-340[»]
1B9YX-ray3.00A1-340[»]
1GG2X-ray2.40B1-340[»]
1GOTX-ray2.00B1-340[»]
1GP2X-ray2.30B1-340[»]
1OMWX-ray2.50B1-340[»]
1TBGX-ray2.10A/B/C/D1-340[»]
1XHMX-ray2.70A1-340[»]
2BCJX-ray3.06B2-340[»]
2TRCX-ray2.40B1-340[»]
3AH8X-ray2.90B1-340[»]
3CIKX-ray2.75B1-340[»]
3KRWX-ray2.90B1-340[»]
3KRXX-ray3.10B1-340[»]
3PSCX-ray2.67B1-340[»]
3PVUX-ray2.48B1-340[»]
3PVWX-ray2.49B1-340[»]
3UZSX-ray4.52B1-340[»]
3V5WX-ray2.07B1-340[»]
4MK0X-ray2.40B2-340[»]
ProteinModelPortaliP62871.
SMRiP62871. Positions 2-340.

Miscellaneous databases

EvolutionaryTraceiP62871.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati53 – 8331WD 1Add
BLAST
Repeati95 – 12531WD 2Add
BLAST
Repeati141 – 17030WD 3Add
BLAST
Repeati182 – 21231WD 4Add
BLAST
Repeati224 – 25431WD 5Add
BLAST
Repeati268 – 29831WD 6Add
BLAST
Repeati310 – 34031WD 7Add
BLAST

Sequence similaritiesi

Contains 7 WD repeats.

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiCOG2319.
GeneTreeiENSGT00740000115196.
HOGENOMiHOG000176356.
HOVERGENiHBG000188.
InParanoidiP62871.
KOiK04536.
OMAiRIVMRPR.
OrthoDBiEOG7GN2N5.
TreeFamiTF106149.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR001632. Gprotein_B.
IPR016346. Guanine_nucleotide-bd_bsu.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 7 hits.
[Graphical view]
PIRSFiPIRSF002394. GN-bd_beta. 1 hit.
PRINTSiPR00319. GPROTEINB.
PR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62871-1 [UniParc]FASTAAdd to Basket

« Hide

MSELDQLRQE AEQLKNQIRD ARKACADATL SQITNNIDPV GRIQMRTRRT    50
LRGHLAKIYA MHWGTDSRLL VSASQDGKLI IWDSYTTNKV HAIPLRSSWV 100
MTCAYAPSGN YVACGGLDNI CSIYNLKTRE GNVRVSRELA GHTGYLSCCR 150
FLDDNQIVTS SGDTTCALWD IETGQQTTTF TGHTGDVMSL SLAPDTRLFV 200
SGACDASAKL WDVREGMCRQ TFTGHESDIN AICFFPNGNA FATGSDDATC 250
RLFDLRADQE LMTYSHDNII CGITSVSFSK SGRLLLAGYD DFNCNVWDAL 300
KADRAGVLAG HDNRVSCLGV TDDGMAVATG SWDSFLKIWN 340
Length:340
Mass (Da):37,377
Last modified:January 23, 2007 - v3
Checksum:i896CBD32D2686598
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti71 – 711V → L in CAA26875. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X03073 mRNA. Translation: CAA26875.1.
M13236 mRNA. Translation: AAA30792.1.
BC105260 mRNA. Translation: AAI05261.1.
PIRiA24225. RGBOB1.
RefSeqiNP_786971.2. NM_175777.3.
XP_005217074.1. XM_005217017.1.
UniGeneiBt.57702.

Genome annotation databases

EnsembliENSBTAT00000000259; ENSBTAP00000000259; ENSBTAG00000000215.
ENSBTAT00000045065; ENSBTAP00000042481; ENSBTAG00000000215.
GeneIDi281201.
KEGGibta:281201.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X03073 mRNA. Translation: CAA26875.1 .
M13236 mRNA. Translation: AAA30792.1 .
BC105260 mRNA. Translation: AAI05261.1 .
PIRi A24225. RGBOB1.
RefSeqi NP_786971.2. NM_175777.3.
XP_005217074.1. XM_005217017.1.
UniGenei Bt.57702.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1A0R X-ray 2.80 B 2-340 [» ]
1B9X X-ray 3.00 A 1-340 [» ]
1B9Y X-ray 3.00 A 1-340 [» ]
1GG2 X-ray 2.40 B 1-340 [» ]
1GOT X-ray 2.00 B 1-340 [» ]
1GP2 X-ray 2.30 B 1-340 [» ]
1OMW X-ray 2.50 B 1-340 [» ]
1TBG X-ray 2.10 A/B/C/D 1-340 [» ]
1XHM X-ray 2.70 A 1-340 [» ]
2BCJ X-ray 3.06 B 2-340 [» ]
2TRC X-ray 2.40 B 1-340 [» ]
3AH8 X-ray 2.90 B 1-340 [» ]
3CIK X-ray 2.75 B 1-340 [» ]
3KRW X-ray 2.90 B 1-340 [» ]
3KRX X-ray 3.10 B 1-340 [» ]
3PSC X-ray 2.67 B 1-340 [» ]
3PVU X-ray 2.48 B 1-340 [» ]
3PVW X-ray 2.49 B 1-340 [» ]
3UZS X-ray 4.52 B 1-340 [» ]
3V5W X-ray 2.07 B 1-340 [» ]
4MK0 X-ray 2.40 B 2-340 [» ]
ProteinModelPortali P62871.
SMRi P62871. Positions 2-340.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 158560. 5 interactions.
DIPi DIP-29227N.
IntActi P62871. 5 interactions.
MINTi MINT-1864875.

Proteomic databases

PaxDbi P62871.
PRIDEi P62871.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSBTAT00000000259 ; ENSBTAP00000000259 ; ENSBTAG00000000215 .
ENSBTAT00000045065 ; ENSBTAP00000042481 ; ENSBTAG00000000215 .
GeneIDi 281201.
KEGGi bta:281201.

Organism-specific databases

CTDi 2782.

Phylogenomic databases

eggNOGi COG2319.
GeneTreei ENSGT00740000115196.
HOGENOMi HOG000176356.
HOVERGENi HBG000188.
InParanoidi P62871.
KOi K04536.
OMAi RIVMRPR.
OrthoDBi EOG7GN2N5.
TreeFami TF106149.

Enzyme and pathway databases

Reactomei REACT_202137. Regulation of water balance by renal Aquaporins.
REACT_202218. G beta:gamma signalling through PI3Kgamma.
REACT_205384. G alpha (12/13) signalling events.
REACT_206547. G alpha (s) signalling events.
REACT_208538. Activation of G protein gated Potassium channels.
REACT_209033. G alpha (z) signalling events.
REACT_209198. Inactivation, recovery and regulation of the phototransduction cascade.
REACT_209521. G alpha (q) signalling events.
REACT_209727. Ca2+ pathway.
REACT_210152. Thromboxane signalling through TP receptor.
REACT_210568. G alpha (i) signalling events.
REACT_211545. ADP signalling through P2Y purinoceptor 1.
REACT_211562. Activation of the phototransduction cascade.
REACT_215840. Olfactory Signaling Pathway.
REACT_215912. Thrombin signalling through proteinase activated receptors (PARs).
REACT_217228. Presynaptic function of Kainate receptors.
REACT_217846. Glucagon-like Peptide-1 (GLP1) regulates insulin secretion.
REACT_218219. Adrenaline,noradrenaline inhibits insulin secretion.
REACT_219437. Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits.
REACT_219794. ADP signalling through P2Y purinoceptor 12.
REACT_220607. Glucagon-type ligand receptors.
REACT_221707. Glucagon signaling in metabolic regulation.
REACT_222419. G-protein activation.
REACT_224596. G beta:gamma signalling through PLC beta.
REACT_227415. Prostacyclin signalling through prostacyclin receptor.

Miscellaneous databases

EvolutionaryTracei P62871.
NextBioi 20805257.

Family and domain databases

Gene3Di 2.130.10.10. 1 hit.
InterProi IPR020472. G-protein_beta_WD-40_rep.
IPR001632. Gprotein_B.
IPR016346. Guanine_nucleotide-bd_bsu.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view ]
Pfami PF00400. WD40. 7 hits.
[Graphical view ]
PIRSFi PIRSF002394. GN-bd_beta. 1 hit.
PRINTSi PR00319. GPROTEINB.
PR00320. GPROTEINBRPT.
SMARTi SM00320. WD40. 7 hits.
[Graphical view ]
SUPFAMi SSF50978. SSF50978. 1 hit.
PROSITEi PS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Repetitive segmental structure of the transducin beta subunit: homology with the CDC4 gene and identification of related mRNAs."
    Fong H.K.W., Hurley J.B., Hopkins R.S., Miake-Lye R., Johnson M.S., Doolittle R.F., Simon M.I.
    Proc. Natl. Acad. Sci. U.S.A. 83:2162-2166(1986) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "Primary structure of the beta-subunit of bovine transducin deduced from the cDNA sequence."
    Sugimoto K., Nukada T., Tanabe T., Takahashi H., Noda M., Minamino N., Kangawa K., Matsuo H., Hirose T., Inayama S., Numa S.
    FEBS Lett. 191:235-240(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  3. NIH - Mammalian Gene Collection (MGC) project
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Hereford.
    Tissue: Ascending colon.
  4. "Activation of heterotrimeric G proteins by a high energy phosphate transfer via nucleoside diphosphate kinase (NDPK) B and Gbeta subunits. Complex formation of NDPK B with Gbeta gamma dimers and phosphorylation of His-266 IN Gbeta."
    Cuello F., Schulze R.A., Heemeyer F., Meyer H.E., Lutz S., Jakobs K.H., Niroomand F., Wieland T.
    J. Biol. Chem. 278:7220-7226(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION AT HIS-266.
  5. "The structure of the G protein heterotrimer Gi alpha 1 beta 1 gamma 2."
    Wall M.A., Coleman D.E., Lee E., Iniguez-Lluhi J.A., Posner B.A., Gilman A.G., Sprang S.R.
    Cell 83:1047-1058(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.3 ANGSTROMS) OF HETEROTRIMER.
  6. "Crystal structure of a G-protein beta gamma dimer at 2.1-A resolution."
    Sondek J., Bohm A., Lambright D.G., Hamm H.E., Sigler P.B.
    Nature 379:369-374(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS) OF BETA-GAMMA DIMER.
  7. "Phosducin induces a structural change in transducin beta gamma."
    Loew A., Ho Y.K., Blundell T., Bax B.
    Structure 6:1007-1019(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS) OF COMPLEX WITH PHOSDUCIN.
  8. "Keeping G proteins at bay: a complex between G protein-coupled receptor kinase 2 and Gbetagamma."
    Lodowski D.T., Pitcher J.A., Capel W.D., Lefkowitz R.J., Tesmer J.J.
    Science 300:1256-1262(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) OF COMPLEX WITH ADRBK1 AND GNG2.

Entry informationi

Entry nameiGBB1_BOVIN
AccessioniPrimary (citable) accession number: P62871
Secondary accession number(s): P04697, P04901, Q3MHF1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 13, 1987
Last sequence update: January 23, 2007
Last modified: September 3, 2014
This is version 101 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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