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Protein

40S ribosomal protein S28

Gene

Rps28

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-MMU-72649 Translation initiation complex formation
R-MMU-72689 Formation of a pool of free 40S subunits
R-MMU-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-MMU-72702 Ribosomal scanning and start codon recognition
R-MMU-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S28
Gene namesi
Name:Rps28
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 17

Organism-specific databases

MGIiMGI:1859516 Rps28

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001368231 – 6940S ribosomal protein S28Add BLAST69

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei1N-acetylmethionineBy similarity1
Modified residuei41PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

EPDiP62858
PaxDbiP62858
PeptideAtlasiP62858
PRIDEiP62858

PTM databases

iPTMnetiP62858
PhosphoSitePlusiP62858
SwissPalmiP62858

Expressioni

Gene expression databases

BgeeiENSMUSG00000067288
CleanExiMM_RPS28
ExpressionAtlasiP62858 baseline and differential
GenevisibleiP62858 MM

Interactioni

Subunit structurei

Component of the 40S small ribosomal subunit.By similarity

Protein-protein interaction databases

BioGridi207567, 2 interactors
IntActiP62858, 4 interactors
MINTiP62858
STRINGi10090.ENSMUSP00000110013

Structurei

3D structure databases

ProteinModelPortaliP62858
SMRiP62858
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3502 Eukaryota
COG2053 LUCA
GeneTreeiENSGT00910000144227
HOVERGENiHBG000219
InParanoidiP62858
KOiK02979
OMAiMHGEASQ
OrthoDBiEOG091G19WT
PhylomeDBiP62858
TreeFamiTF300136

Family and domain databases

CDDicd04457 S1_S28E, 1 hit
HAMAPiMF_00292 Ribosomal_S28e, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000289 Ribosomal_S28e
IPR028626 Ribosomal_S28e_CS
PANTHERiPTHR10769 PTHR10769, 1 hit
PfamiView protein in Pfam
PF01200 Ribosomal_S28e, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005541 Ribosomal_S28e, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS00961 RIBOSOMAL_S28E, 1 hit

Sequencei

Sequence statusi: Complete.

P62858-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTSRVQPIK LARVTKVLGR TGSQGQCTQV RVEFMDDTSR SIIRNVKGPV
60
REGDVLTLLE SEREARRLR
Length:69
Mass (Da):7,841
Last modified:August 16, 2004 - v1
Checksum:i49902FE9376EB74F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U11248 mRNA Translation: AAA19605.1
AK002919 mRNA Translation: BAB22456.1
AF110520 Genomic DNA Translation: AAC97967.1
AF528162 Genomic DNA Translation: AAO17375.1
BC010987 mRNA Translation: AAH10987.1
BC090982 mRNA Translation: AAH90982.1
CCDSiCCDS37571.1
RefSeqiNP_058540.1, NM_016844.2
XP_006524687.1, XM_006524624.3
UniGeneiMm.352374
Mm.353967
Mm.371603
Mm.393918

Genome annotation databases

EnsembliENSMUST00000087342; ENSMUSP00000110013; ENSMUSG00000067288
ENSMUST00000166693; ENSMUSP00000133642; ENSMUSG00000067288
ENSMUST00000173019; ENSMUSP00000134615; ENSMUSG00000067288
ENSMUST00000173844; ENSMUSP00000133357; ENSMUSG00000067288
GeneIDi54127
KEGGimmu:54127
UCSCiuc008bzs.2 mouse

Similar proteinsi

Entry informationi

Entry nameiRS28_MOUSE
AccessioniPrimary (citable) accession number: P62858
Secondary accession number(s): P25112, Q5BKQ7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 16, 2004
Last sequence update: August 16, 2004
Last modified: May 23, 2018
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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