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P62855

- RS26_MOUSE

UniProt

P62855 - RS26_MOUSE

Protein

40S ribosomal protein S26

Gene

Rps26

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    ReactomeiREACT_196445. SRP-dependent cotranslational protein targeting to membrane.
    REACT_198524. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
    REACT_198528. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    40S ribosomal protein S26
    Gene namesi
    Name:Rps26
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 10

    Organism-specific databases

    MGIiMGI:1351628. Rps26.

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 11511440S ribosomal protein S26PRO_0000204511Add
    BLAST

    Proteomic databases

    MaxQBiP62855.
    PaxDbiP62855.
    PRIDEiP62855.

    PTM databases

    PhosphoSiteiP62855.

    Expressioni

    Gene expression databases

    BgeeiP62855.
    CleanExiMM_RPS26.
    GenevestigatoriP62855.

    Interactioni

    Protein-protein interaction databases

    BioGridi205177. 10 interactions.
    IntActiP62855. 2 interactions.
    MINTiMINT-4153390.

    Structurei

    3D structure databases

    ProteinModelPortaliP62855.
    SMRiP62855. Positions 2-108.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S26e family.Curated

    Phylogenomic databases

    eggNOGiCOG4830.
    HOGENOMiHOG000108824.
    HOVERGENiHBG079147.
    InParanoidiP62855.
    KOiK02976.
    OMAiISEASVY.
    OrthoDBiEOG7B31Q7.
    PhylomeDBiP62855.
    TreeFamiTF300234.

    Family and domain databases

    InterProiIPR000892. Ribosomal_S26e.
    [Graphical view]
    PANTHERiPTHR12538. PTHR12538. 1 hit.
    PfamiPF01283. Ribosomal_S26e. 1 hit.
    [Graphical view]
    PROSITEiPS00733. RIBOSOMAL_S26E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P62855-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTKKRRNNGR AKKGRGHVQP IRCTNCARCV PKDKAIKKFV IRNIVEAAAV    50
    RDISEASVFD AYVLPKLYVK LHYCVSCAIH SKVVRNRSRE ARKDRTPPPR 100
    FRPAGAAPRP PPKPM 115
    Length:115
    Mass (Da):13,015
    Last modified:January 23, 2007 - v3
    Checksum:iF60DF98F8900D968
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti17 – 171H → N in AAB07729. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U67770 mRNA. Translation: AAB07729.1.
    AK008301 mRNA. Translation: BAB25586.1.
    AK010689 mRNA. Translation: BAB27121.1.
    AK012722 mRNA. Translation: BAB28433.1.
    AK018702 mRNA. Translation: BAB31353.1.
    BC036987 mRNA. Translation: AAH36987.1.
    BC081452 mRNA. Translation: AAH81452.1.
    CCDSiCCDS36090.1.
    RefSeqiNP_038793.2. NM_013765.2.
    UniGeneiMm.261679.

    Genome annotation databases

    EnsembliENSMUST00000026420; ENSMUSP00000026420; ENSMUSG00000025362.
    ENSMUST00000077208; ENSMUSP00000076447; ENSMUSG00000059775.
    GeneIDi27370.
    KEGGimmu:27370.
    UCSCiuc007hno.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U67770 mRNA. Translation: AAB07729.1 .
    AK008301 mRNA. Translation: BAB25586.1 .
    AK010689 mRNA. Translation: BAB27121.1 .
    AK012722 mRNA. Translation: BAB28433.1 .
    AK018702 mRNA. Translation: BAB31353.1 .
    BC036987 mRNA. Translation: AAH36987.1 .
    BC081452 mRNA. Translation: AAH81452.1 .
    CCDSi CCDS36090.1.
    RefSeqi NP_038793.2. NM_013765.2.
    UniGenei Mm.261679.

    3D structure databases

    ProteinModelPortali P62855.
    SMRi P62855. Positions 2-108.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 205177. 10 interactions.
    IntActi P62855. 2 interactions.
    MINTi MINT-4153390.

    PTM databases

    PhosphoSitei P62855.

    Proteomic databases

    MaxQBi P62855.
    PaxDbi P62855.
    PRIDEi P62855.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000026420 ; ENSMUSP00000026420 ; ENSMUSG00000025362 .
    ENSMUST00000077208 ; ENSMUSP00000076447 ; ENSMUSG00000059775 .
    GeneIDi 27370.
    KEGGi mmu:27370.
    UCSCi uc007hno.2. mouse.

    Organism-specific databases

    CTDi 6231.
    MGIi MGI:1351628. Rps26.

    Phylogenomic databases

    eggNOGi COG4830.
    HOGENOMi HOG000108824.
    HOVERGENi HBG079147.
    InParanoidi P62855.
    KOi K02976.
    OMAi ISEASVY.
    OrthoDBi EOG7B31Q7.
    PhylomeDBi P62855.
    TreeFami TF300234.

    Enzyme and pathway databases

    Reactomei REACT_196445. SRP-dependent cotranslational protein targeting to membrane.
    REACT_198524. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
    REACT_198528. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

    Miscellaneous databases

    NextBioi 24189.
    PROi P62855.
    SOURCEi Search...

    Gene expression databases

    Bgeei P62855.
    CleanExi MM_RPS26.
    Genevestigatori P62855.

    Family and domain databases

    InterProi IPR000892. Ribosomal_S26e.
    [Graphical view ]
    PANTHERi PTHR12538. PTHR12538. 1 hit.
    Pfami PF01283. Ribosomal_S26e. 1 hit.
    [Graphical view ]
    PROSITEi PS00733. RIBOSOMAL_S26E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Rocha D., Carrier A., Victorero G., Mattei M.-G., Szatanik M., Guenet J.-L., Jordan B.
      Submitted (SEP-1996) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: C57BL/6.
    2. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Kidney and Small intestine.
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6 and FVB/N.
      Tissue: Brain and Colon.

    Entry informationi

    Entry nameiRS26_MOUSE
    AccessioniPrimary (citable) accession number: P62855
    Secondary accession number(s): P02383, P70394, Q06722
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 16, 2004
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 90 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3