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P62855

- RS26_MOUSE

UniProt

P62855 - RS26_MOUSE

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Protein

40S ribosomal protein S26

Gene

Rps26

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiREACT_196445. SRP-dependent cotranslational protein targeting to membrane.
REACT_198524. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
REACT_198528. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
REACT_231519. Eukaryotic Translation Termination.
REACT_236458. Ribosomal scanning and start codon recognition.
REACT_249044. Formation of a pool of free 40S subunits.
REACT_249316. Formation of the ternary complex, and subsequently, the 43S complex.
REACT_253640. Peptide chain elongation.
REACT_256488. Translation initiation complex formation.
REACT_259469. L13a-mediated translational silencing of Ceruloplasmin expression.
REACT_262078. GTP hydrolysis and joining of the 60S ribosomal subunit.

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S26
Gene namesi
Name:Rps26
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 10, UP000000589: Chromosome 8

Organism-specific databases

MGIiMGI:1351628. Rps26.

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 11511440S ribosomal protein S26PRO_0000204511Add
BLAST

Proteomic databases

MaxQBiP62855.
PaxDbiP62855.
PRIDEiP62855.

PTM databases

PhosphoSiteiP62855.

Expressioni

Gene expression databases

BgeeiP62855.
CleanExiMM_RPS26.
ExpressionAtlasiP62855. baseline and differential.
GenevestigatoriP62855.

Interactioni

Protein-protein interaction databases

BioGridi205177. 10 interactions.
IntActiP62855. 2 interactions.
MINTiMINT-4153390.

Structurei

3D structure databases

ProteinModelPortaliP62855.
SMRiP62855. Positions 2-99.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S26e family.Curated

Phylogenomic databases

eggNOGiCOG4830.
HOGENOMiHOG000108824.
HOVERGENiHBG079147.
InParanoidiP62855.
KOiK02976.
OMAiISEASVY.
OrthoDBiEOG7B31Q7.
PhylomeDBiP62855.
TreeFamiTF300234.

Family and domain databases

InterProiIPR000892. Ribosomal_S26e.
[Graphical view]
PANTHERiPTHR12538. PTHR12538. 1 hit.
PfamiPF01283. Ribosomal_S26e. 1 hit.
[Graphical view]
PROSITEiPS00733. RIBOSOMAL_S26E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62855-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTKKRRNNGR AKKGRGHVQP IRCTNCARCV PKDKAIKKFV IRNIVEAAAV
60 70 80 90 100
RDISEASVFD AYVLPKLYVK LHYCVSCAIH SKVVRNRSRE ARKDRTPPPR
110
FRPAGAAPRP PPKPM
Length:115
Mass (Da):13,015
Last modified:January 23, 2007 - v3
Checksum:iF60DF98F8900D968
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti17 – 171H → N in AAB07729. 1 PublicationCurated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U67770 mRNA. Translation: AAB07729.1.
AK008301 mRNA. Translation: BAB25586.1.
AK010689 mRNA. Translation: BAB27121.1.
AK012722 mRNA. Translation: BAB28433.1.
AK018702 mRNA. Translation: BAB31353.1.
BC036987 mRNA. Translation: AAH36987.1.
BC081452 mRNA. Translation: AAH81452.1.
CCDSiCCDS36090.1.
RefSeqiNP_038793.2. NM_013765.2.
UniGeneiMm.261679.

Genome annotation databases

EnsembliENSMUST00000026420; ENSMUSP00000026420; ENSMUSG00000025362.
ENSMUST00000077208; ENSMUSP00000076447; ENSMUSG00000059775.
GeneIDi27370.
KEGGimmu:27370.
UCSCiuc007hno.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U67770 mRNA. Translation: AAB07729.1 .
AK008301 mRNA. Translation: BAB25586.1 .
AK010689 mRNA. Translation: BAB27121.1 .
AK012722 mRNA. Translation: BAB28433.1 .
AK018702 mRNA. Translation: BAB31353.1 .
BC036987 mRNA. Translation: AAH36987.1 .
BC081452 mRNA. Translation: AAH81452.1 .
CCDSi CCDS36090.1.
RefSeqi NP_038793.2. NM_013765.2.
UniGenei Mm.261679.

3D structure databases

ProteinModelPortali P62855.
SMRi P62855. Positions 2-99.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 205177. 10 interactions.
IntActi P62855. 2 interactions.
MINTi MINT-4153390.

PTM databases

PhosphoSitei P62855.

Proteomic databases

MaxQBi P62855.
PaxDbi P62855.
PRIDEi P62855.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000026420 ; ENSMUSP00000026420 ; ENSMUSG00000025362 .
ENSMUST00000077208 ; ENSMUSP00000076447 ; ENSMUSG00000059775 .
GeneIDi 27370.
KEGGi mmu:27370.
UCSCi uc007hno.2. mouse.

Organism-specific databases

CTDi 6231.
MGIi MGI:1351628. Rps26.

Phylogenomic databases

eggNOGi COG4830.
HOGENOMi HOG000108824.
HOVERGENi HBG079147.
InParanoidi P62855.
KOi K02976.
OMAi ISEASVY.
OrthoDBi EOG7B31Q7.
PhylomeDBi P62855.
TreeFami TF300234.

Enzyme and pathway databases

Reactomei REACT_196445. SRP-dependent cotranslational protein targeting to membrane.
REACT_198524. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
REACT_198528. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
REACT_231519. Eukaryotic Translation Termination.
REACT_236458. Ribosomal scanning and start codon recognition.
REACT_249044. Formation of a pool of free 40S subunits.
REACT_249316. Formation of the ternary complex, and subsequently, the 43S complex.
REACT_253640. Peptide chain elongation.
REACT_256488. Translation initiation complex formation.
REACT_259469. L13a-mediated translational silencing of Ceruloplasmin expression.
REACT_262078. GTP hydrolysis and joining of the 60S ribosomal subunit.

Miscellaneous databases

NextBioi 24189.
PROi P62855.
SOURCEi Search...

Gene expression databases

Bgeei P62855.
CleanExi MM_RPS26.
ExpressionAtlasi P62855. baseline and differential.
Genevestigatori P62855.

Family and domain databases

InterProi IPR000892. Ribosomal_S26e.
[Graphical view ]
PANTHERi PTHR12538. PTHR12538. 1 hit.
Pfami PF01283. Ribosomal_S26e. 1 hit.
[Graphical view ]
PROSITEi PS00733. RIBOSOMAL_S26E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Rocha D., Carrier A., Victorero G., Mattei M.-G., Szatanik M., Guenet J.-L., Jordan B.
    Submitted (SEP-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: C57BL/6.
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Kidney and Small intestine.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6 and FVB/N.
    Tissue: Brain and Colon.

Entry informationi

Entry nameiRS26_MOUSE
AccessioniPrimary (citable) accession number: P62855
Secondary accession number(s): P02383, P70394, Q06722
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2004
Last sequence update: January 23, 2007
Last modified: November 26, 2014
This is version 92 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3