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Protein

40S ribosomal protein S15

Gene

RPS15

Organism
Sus scrofa (Pig)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S15
Alternative name(s):
RIG protein
Gene namesi
Name:RPS15
Synonyms:RIG
OrganismiSus scrofa (Pig)
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 2

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001300302 – 14540S ribosomal protein S15Add BLAST144

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiP62844.
PeptideAtlasiP62844.
PRIDEiP62844.

Expressioni

Gene expression databases

BgeeiENSSSCG00000023248.
GenevisibleiP62844. SS.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000023972.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J7Pelectron microscopy3.50SP1-145[»]
3J7Relectron microscopy3.90SP1-145[»]
ProteinModelPortaliP62844.
SMRiP62844.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0898. Eukaryota.
COG0185. LUCA.
GeneTreeiENSGT00390000000475.
HOVERGENiHBG000709.
InParanoidiP62844.
KOiK02958.
OMAiVIRTHCR.
OrthoDBiEOG091G0ZRG.
TreeFamiTF318650.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19. 1 hit.
InterProiView protein in InterPro
IPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiView protein in Pfam
PF00203. Ribosomal_S19. 1 hit.
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01025. uS19_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00323. RIBOSOMAL_S19. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62844-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEVEQKKKR TFRKFTYRGV DLDQLLDMSY EQLMQLYSAR QRRRLNRGLR
60 70 80 90 100
RKQHSLLKRL RKAKKEAPPM EKPEVVKTHL RDMIILPEMV GSMVGVYNGK
110 120 130 140
TFNQVEIKPE MIGHYLGEFS ITYKPVKHGR PGIGATHSSR FIPLK
Length:145
Mass (Da):17,040
Last modified:January 23, 2007 - v2
Checksum:iCA2C682302C7B387
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti137 – 138HS → DF in CAA23089 (PubMed:8672129).Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
F14497 mRNA. Translation: CAA23089.1.
AB005624 mRNA. Translation: BAA21510.1.
RefSeqiNP_999499.1. NM_214334.1.
UniGeneiSsc.12962.

Genome annotation databases

EnsembliENSSSCT00000028123; ENSSSCP00000023972; ENSSSCG00000023248.
GeneIDi397607.
KEGGissc:397607.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
F14497 mRNA. Translation: CAA23089.1.
AB005624 mRNA. Translation: BAA21510.1.
RefSeqiNP_999499.1. NM_214334.1.
UniGeneiSsc.12962.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J7Pelectron microscopy3.50SP1-145[»]
3J7Relectron microscopy3.90SP1-145[»]
ProteinModelPortaliP62844.
SMRiP62844.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000023972.

Proteomic databases

PaxDbiP62844.
PeptideAtlasiP62844.
PRIDEiP62844.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000028123; ENSSSCP00000023972; ENSSSCG00000023248.
GeneIDi397607.
KEGGissc:397607.

Organism-specific databases

CTDi6209.

Phylogenomic databases

eggNOGiKOG0898. Eukaryota.
COG0185. LUCA.
GeneTreeiENSGT00390000000475.
HOVERGENiHBG000709.
InParanoidiP62844.
KOiK02958.
OMAiVIRTHCR.
OrthoDBiEOG091G0ZRG.
TreeFamiTF318650.

Gene expression databases

BgeeiENSSSCG00000023248.
GenevisibleiP62844. SS.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19. 1 hit.
InterProiView protein in InterPro
IPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiView protein in Pfam
PF00203. Ribosomal_S19. 1 hit.
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01025. uS19_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00323. RIBOSOMAL_S19. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS15_PIG
AccessioniPrimary (citable) accession number: P62844
Secondary accession number(s): P11174, Q29186
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 16, 2004
Last sequence update: January 23, 2007
Last modified: June 7, 2017
This is version 89 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.