Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P62669

- RS9_THET2

UniProt

P62669 - RS9_THET2

Protein

30S ribosomal protein S9

Gene

rpsI

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Part of the top of the head of the 30S subunit. The C-terminal region penetrates the head emerging in the P-site where it contacts tRNA By similarity.By similarity

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro
    3. tRNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding, tRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1112-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S9
    Gene namesi
    Name:rpsI
    Synonyms:rps9
    Ordered Locus Names:TT_C1100
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12812830S ribosomal protein S9PRO_0000111430Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Contacts proteins S7 and S10 By similarity.By similarity

    Protein-protein interaction databases

    STRINGi262724.TTC1100.

    Structurei

    Secondary structure

    1
    128
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi4 – 63
    Beta strandi7 – 126
    Beta strandi13 – 2311
    Beta strandi26 – 327
    Helixi33 – 364
    Beta strandi37 – 393
    Helixi43 – 475
    Helixi48 – 536
    Beta strandi56 – 583
    Beta strandi59 – 6810
    Helixi70 – 8819
    Helixi90 – 923
    Helixi93 – 964
    Turni97 – 1026
    Beta strandi114 – 1185

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1I94X-ray3.20I1-128[»]
    1I96X-ray4.20I1-128[»]
    1TWTmodel-L1-128[»]
    2J00X-ray2.80I1-128[»]
    2J02X-ray2.80I1-128[»]
    2OW8X-ray3.71j1-128[»]
    2QNHX-ray3.83j1-128[»]
    2R1Gelectron microscopy12.50G2-128[»]
    2UXBX-ray3.10I1-128[»]
    2UXCX-ray2.90I1-128[»]
    2UXDX-ray3.20I1-128[»]
    2V46X-ray3.80I1-128[»]
    2V48X-ray3.80I1-128[»]
    2VQEX-ray2.50I1-128[»]
    2VQFX-ray2.90I1-128[»]
    2WDGX-ray3.30I1-128[»]
    2WDHX-ray3.30I1-128[»]
    2WDKX-ray3.50I1-128[»]
    2WDMX-ray3.50I1-128[»]
    2WH1X-ray3.45I1-128[»]
    2WH3X-ray3.45I1-128[»]
    3D5AX-ray3.21I1-128[»]
    3D5CX-ray3.21I1-128[»]
    3F1EX-ray3.00I1-128[»]
    3F1GX-ray3.00I1-128[»]
    3MR8X-ray3.62I2-128[»]
    3MS0X-ray3.62I2-128[»]
    3PYNX-ray3.50I2-128[»]
    3PYQX-ray3.50I2-128[»]
    3PYSX-ray3.40I2-128[»]
    3PYUX-ray3.40I2-128[»]
    3T1HX-ray3.11I1-128[»]
    3T1YX-ray2.80I1-128[»]
    4KBTX-ray3.86I2-128[»]
    4KBVX-ray3.86I2-128[»]
    4KCYX-ray3.50I2-128[»]
    4KD0X-ray3.50I2-128[»]
    4KD8X-ray3.50I2-128[»]
    4KDAX-ray3.50I2-128[»]
    4KDGX-ray4.00I2-128[»]
    4KDJX-ray4.00I2-128[»]
    4KFHX-ray3.40I2-128[»]
    4KFKX-ray3.40I2-128[»]
    4KVBX-ray4.20I1-128[»]
    4L6KX-ray3.40I2-128[»]
    4L6MX-ray3.40I2-128[»]
    ProteinModelPortaliP62669.
    SMRiP62669. Positions 2-128.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP62669.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S9P family.Curated

    Phylogenomic databases

    eggNOGiCOG0103.
    KOiK02996.
    OMAiVEINFAV.
    OrthoDBiEOG6MWNH0.

    Family and domain databases

    Gene3Di3.30.230.10. 1 hit.
    HAMAPiMF_00532_B. Ribosomal_S9_B.
    InterProiIPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    IPR000754. Ribosomal_S9.
    IPR023035. Ribosomal_S9_bac/plastid.
    IPR020574. Ribosomal_S9_CS.
    [Graphical view]
    PANTHERiPTHR21569. PTHR21569. 1 hit.
    PfamiPF00380. Ribosomal_S9. 1 hit.
    [Graphical view]
    SUPFAMiSSF54211. SSF54211. 1 hit.
    PROSITEiPS00360. RIBOSOMAL_S9. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P62669-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEQYYGTGRR KEAVARVFLR PGNGKVTVNG QDFNEYFQGL VRAVAALEPL    50
    RAVDALGRFD AYITVRGGGK SGQIDAIKLG IARALVQYNP DYRAKLKPLG 100
    FLTRDARVVE RKKYGKHKAR RAPQYSKR 128
    Length:128
    Mass (Da):14,402
    Last modified:July 19, 2004 - v1
    Checksum:i7886A020CC5D9934
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ409331 Genomic DNA. Translation: CAC35063.1.
    AE017221 Genomic DNA. Translation: AAS81442.1.
    RefSeqiYP_005069.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81442; AAS81442; TT_C1100.
    GeneIDi2776056.
    KEGGitth:TTC1100.
    PATRICi23952603. VBITheThe54392_1092.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ409331 Genomic DNA. Translation: CAC35063.1 .
    AE017221 Genomic DNA. Translation: AAS81442.1 .
    RefSeqi YP_005069.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1I94 X-ray 3.20 I 1-128 [» ]
    1I96 X-ray 4.20 I 1-128 [» ]
    1TWT model - L 1-128 [» ]
    2J00 X-ray 2.80 I 1-128 [» ]
    2J02 X-ray 2.80 I 1-128 [» ]
    2OW8 X-ray 3.71 j 1-128 [» ]
    2QNH X-ray 3.83 j 1-128 [» ]
    2R1G electron microscopy 12.50 G 2-128 [» ]
    2UXB X-ray 3.10 I 1-128 [» ]
    2UXC X-ray 2.90 I 1-128 [» ]
    2UXD X-ray 3.20 I 1-128 [» ]
    2V46 X-ray 3.80 I 1-128 [» ]
    2V48 X-ray 3.80 I 1-128 [» ]
    2VQE X-ray 2.50 I 1-128 [» ]
    2VQF X-ray 2.90 I 1-128 [» ]
    2WDG X-ray 3.30 I 1-128 [» ]
    2WDH X-ray 3.30 I 1-128 [» ]
    2WDK X-ray 3.50 I 1-128 [» ]
    2WDM X-ray 3.50 I 1-128 [» ]
    2WH1 X-ray 3.45 I 1-128 [» ]
    2WH3 X-ray 3.45 I 1-128 [» ]
    3D5A X-ray 3.21 I 1-128 [» ]
    3D5C X-ray 3.21 I 1-128 [» ]
    3F1E X-ray 3.00 I 1-128 [» ]
    3F1G X-ray 3.00 I 1-128 [» ]
    3MR8 X-ray 3.62 I 2-128 [» ]
    3MS0 X-ray 3.62 I 2-128 [» ]
    3PYN X-ray 3.50 I 2-128 [» ]
    3PYQ X-ray 3.50 I 2-128 [» ]
    3PYS X-ray 3.40 I 2-128 [» ]
    3PYU X-ray 3.40 I 2-128 [» ]
    3T1H X-ray 3.11 I 1-128 [» ]
    3T1Y X-ray 2.80 I 1-128 [» ]
    4KBT X-ray 3.86 I 2-128 [» ]
    4KBV X-ray 3.86 I 2-128 [» ]
    4KCY X-ray 3.50 I 2-128 [» ]
    4KD0 X-ray 3.50 I 2-128 [» ]
    4KD8 X-ray 3.50 I 2-128 [» ]
    4KDA X-ray 3.50 I 2-128 [» ]
    4KDG X-ray 4.00 I 2-128 [» ]
    4KDJ X-ray 4.00 I 2-128 [» ]
    4KFH X-ray 3.40 I 2-128 [» ]
    4KFK X-ray 3.40 I 2-128 [» ]
    4KVB X-ray 4.20 I 1-128 [» ]
    4L6K X-ray 3.40 I 2-128 [» ]
    4L6M X-ray 3.40 I 2-128 [» ]
    ProteinModelPortali P62669.
    SMRi P62669. Positions 2-128.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC1100.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81442 ; AAS81442 ; TT_C1100 .
    GeneIDi 2776056.
    KEGGi tth:TTC1100.
    PATRICi 23952603. VBITheThe54392_1092.

    Phylogenomic databases

    eggNOGi COG0103.
    KOi K02996.
    OMAi VEINFAV.
    OrthoDBi EOG6MWNH0.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1112-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P62669.

    Family and domain databases

    Gene3Di 3.30.230.10. 1 hit.
    HAMAPi MF_00532_B. Ribosomal_S9_B.
    InterProi IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    IPR000754. Ribosomal_S9.
    IPR023035. Ribosomal_S9_bac/plastid.
    IPR020574. Ribosomal_S9_CS.
    [Graphical view ]
    PANTHERi PTHR21569. PTHR21569. 1 hit.
    Pfami PF00380. Ribosomal_S9. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54211. SSF54211. 1 hit.
    PROSITEi PS00360. RIBOSOMAL_S9. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
      Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
      EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRS9_THET2
    AccessioniPrimary (citable) accession number: P62669
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 19, 2004
    Last sequence update: July 19, 2004
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3