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P62669 (RS9_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S9
Gene names
Name:rpsI
Synonyms:rps9
Ordered Locus Names:TT_C1100
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length128 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Part of the top of the head of the 30S subunit. The C-terminal region penetrates the head emerging in the P-site where it contacts tRNA By similarity. HAMAP-Rule MF_00532_B

Subunit structure

Part of the 30S ribosomal subunit. Contacts proteins S7 and S10 By similarity.

Sequence similarities

Belongs to the ribosomal protein S9P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
tRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

tRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12812830S ribosomal protein S9 HAMAP-Rule MF_00532_B
PRO_0000111430

Secondary structure

....................... 128
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P62669 [UniParc].

Last modified July 19, 2004. Version 1.
Checksum: 7886A020CC5D9934

FASTA12814,402
        10         20         30         40         50         60 
MEQYYGTGRR KEAVARVFLR PGNGKVTVNG QDFNEYFQGL VRAVAALEPL RAVDALGRFD 

        70         80         90        100        110        120 
AYITVRGGGK SGQIDAIKLG IARALVQYNP DYRAKLKPLG FLTRDARVVE RKKYGKHKAR 


RAPQYSKR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ409331 Genomic DNA. Translation: CAC35063.1.
AE017221 Genomic DNA. Translation: AAS81442.1.
RefSeqYP_005069.1. NC_005835.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1I94X-ray3.20I1-128[»]
1I96X-ray4.20I1-128[»]
1TWTmodel-L1-128[»]
2J00X-ray2.80I1-128[»]
2J02X-ray2.80I1-128[»]
2OW8X-ray3.71j1-128[»]
2QNHX-ray3.83j1-128[»]
2R1Gelectron microscopy12.50G2-128[»]
2UXBX-ray3.10I1-128[»]
2UXCX-ray2.90I1-128[»]
2UXDX-ray3.20I1-128[»]
2V46X-ray3.80I1-128[»]
2V48X-ray3.80I1-128[»]
2VQEX-ray2.50I1-128[»]
2VQFX-ray2.90I1-128[»]
2WDGX-ray3.30I1-128[»]
2WDHX-ray3.30I1-128[»]
2WDKX-ray3.50I1-128[»]
2WDMX-ray3.50I1-128[»]
2WH1X-ray3.45I1-128[»]
2WH3X-ray3.45I1-128[»]
3D5AX-ray3.21I1-128[»]
3D5CX-ray3.21I1-128[»]
3F1EX-ray3.00I1-128[»]
3F1GX-ray3.00I1-128[»]
3MR8X-ray3.62I2-128[»]
3MS0X-ray3.62I2-128[»]
3PYNX-ray3.50I2-128[»]
3PYQX-ray3.50I2-128[»]
3PYSX-ray3.40I2-128[»]
3PYUX-ray3.40I2-128[»]
3T1HX-ray3.11I1-128[»]
3T1YX-ray2.80I1-128[»]
4KBTX-ray3.86I2-128[»]
4KBVX-ray3.86I2-128[»]
4KCYX-ray3.50I2-128[»]
4KD0X-ray3.50I2-128[»]
4KD8X-ray3.50I2-128[»]
4KDAX-ray3.50I2-128[»]
4KDGX-ray4.00I2-128[»]
4KDJX-ray4.00I2-128[»]
4KFHX-ray3.40I2-128[»]
4KFKX-ray3.40I2-128[»]
4L6KX-ray3.40I2-128[»]
4L6MX-ray3.40I2-128[»]
ProteinModelPortalP62669.
SMRP62669. Positions 2-128.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC1100.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS81442; AAS81442; TT_C1100.
GeneID2776056.
KEGGtth:TTC1100.
PATRIC23952603. VBITheThe54392_1092.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0103.
KOK02996.
OMAVEINFAV.
OrthoDBEOG6MWNH0.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1112-MONOMER.

Family and domain databases

Gene3D3.30.230.10. 1 hit.
HAMAPMF_00532_B. Ribosomal_S9_B.
InterProIPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR000754. Ribosomal_S9.
IPR023035. Ribosomal_S9_bac/plastid.
IPR020574. Ribosomal_S9_CS.
[Graphical view]
PANTHERPTHR21569. PTHR21569. 1 hit.
PfamPF00380. Ribosomal_S9. 1 hit.
[Graphical view]
SUPFAMSSF54211. SSF54211. 1 hit.
PROSITEPS00360. RIBOSOMAL_S9. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP62669.

Entry information

Entry nameRS9_THET2
AccessionPrimary (citable) accession number: P62669
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: July 19, 2004
Last modified: May 14, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references