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P62668 (RS8_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S8
Gene names
Name:rpsH
Synonyms:rps8
Ordered Locus Names:TT_C1314
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length138 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit By similarity. HAMAP-Rule MF_01302_B

Subunit structure

Part of the 30S ribosomal subunit. Contacts proteins S5 and S12 By similarity.

Sequence similarities

Belongs to the ribosomal protein S8P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 13813830S ribosomal protein S8 HAMAP-Rule MF_01302_B
PRO_0000126510

Secondary structure

................................. 138
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P62668 [UniParc].

Last modified July 19, 2004. Version 1.
Checksum: 49CC858AD1E4DB5A

FASTA13815,838
        10         20         30         40         50         60 
MLTDPIADML TRIRNATRVY KESTDVPASR FKEEILRILA REGFIKGYER VDVDGKPYLR 

        70         80         90        100        110        120 
VYLKYGPRRQ GPDPRPEQVI HHIRRISKPG RRVYVGVKEI PRVRRGLGIA ILSTSKGVLT 

       130 
DREARKLGVG GELICEVW 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS81656.1.
RefSeqYP_005283.1. NC_005835.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2QNHX-ray3.83i1-138[»]
3D5AX-ray3.21H1-138[»]
3D5CX-ray3.21H1-138[»]
3F1EX-ray3.00H1-138[»]
3F1GX-ray3.00H1-138[»]
3MR8X-ray3.62H1-138[»]
3MS0X-ray3.62H1-138[»]
3PYNX-ray3.50H1-138[»]
3PYQX-ray3.50H1-138[»]
3PYSX-ray3.40H1-138[»]
3PYUX-ray3.40H1-138[»]
4KBTX-ray3.86H1-138[»]
4KBVX-ray3.86H1-138[»]
4KCYX-ray3.50H1-138[»]
4KD0X-ray3.50H1-138[»]
4KD8X-ray3.50H1-138[»]
4KDAX-ray3.50H1-138[»]
4KDGX-ray4.00H1-138[»]
4KDJX-ray4.00H1-138[»]
4KFHX-ray3.40H1-138[»]
4KFKX-ray3.40H1-138[»]
4L6KX-ray3.40H1-138[»]
4L6MX-ray3.40H1-138[»]
ProteinModelPortalP62668.
SMRP62668. Positions 1-138.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS81656; AAS81656; TT_C1314.
GeneID2775861.
KEGGtth:TTC1314.
PATRIC23953035. VBITheThe54392_1306.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0096.
KOK02994.
OMAYKGHGAI.
OrthoDBEOG6Z0QH1.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1329-MONOMER.

Family and domain databases

HAMAPMF_01302_B. Ribosomal_S8_B.
InterProIPR000630. Ribosomal_S8.
[Graphical view]
PANTHERPTHR11758. PTHR11758. 1 hit.
PfamPF00410. Ribosomal_S8. 1 hit.
[Graphical view]
SUPFAMSSF56047. SSF56047. 1 hit.
PROSITEPS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP62668.

Entry information

Entry nameRS8_THET2
AccessionPrimary (citable) accession number: P62668
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: July 19, 2004
Last modified: May 14, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references