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Protein

30S ribosomal protein S7

Gene

rpsG

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding, tRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1347-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S7
Gene namesi
Name:rpsG
Synonyms:rps7
Ordered Locus Names:TT_C1332
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 15615530S ribosomal protein S7PRO_0000124368Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S9 and S11 (By similarity).By similarity

Protein-protein interaction databases

STRINGi262724.TTC1332.

Structurei

Secondary structure

1
156
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi16 – 183Combined sources
Helixi21 – 3010Combined sources
Beta strandi32 – 343Combined sources
Helixi36 – 5318Combined sources
Beta strandi54 – 563Combined sources
Helixi58 – 6811Combined sources
Beta strandi72 – 809Combined sources
Beta strandi83 – 908Combined sources
Helixi93 – 11018Combined sources
Helixi116 – 12914Combined sources
Helixi133 – 14715Combined sources
Helixi148 – 1547Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4KVBX-ray4.20G1-156[»]
4V4IX-ray3.71h1-156[»]
4V4JX-ray3.83h1-156[»]
4V5LX-ray3.10AG1-156[»]
4V63X-ray3.21AG/CG1-156[»]
4V67X-ray3.00AG/CG1-156[»]
4V7PX-ray3.62AG/DG2-156[»]
4V83X-ray3.50AG/CG2-156[»]
4V84X-ray3.40AG/CG2-156[»]
4V9JX-ray3.86AG/CG2-156[»]
4V9KX-ray3.50AG/CG2-156[»]
4V9LX-ray3.50AG/CG2-156[»]
4V9MX-ray4.00AG/CG2-156[»]
4V9NX-ray3.40AG/CG2-156[»]
4V9QX-ray3.40BG/DG2-156[»]
4W29X-ray3.80AG/CG2-156[»]
4XEJX-ray3.80AS07/BS072-156[»]
ProteinModelPortaliP62667.
SMRiP62667. Positions 2-156.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP62667.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S7P family.Curated

Phylogenomic databases

eggNOGiCOG0049.
KOiK02992.
OMAiEVHRMAD.
OrthoDBiEOG6P5ZKW.

Family and domain databases

Gene3Di1.10.455.10. 1 hit.
HAMAPiMF_00480_B. Ribosomal_S7_B.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62667-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARRRRAEVR QLQPDLVYGD VLVTAFINKI MRDGKKNLAA RIFYDACKII
60 70 80 90 100
QEKTGQEPLK VFKQAVENVK PRMEVRSRRV GGANYQVPME VSPRRQQSLA
110 120 130 140 150
LRWLVQAANQ RPERRAAVRI AHELMDAAEG KGGAVKKKED VERMAEANRA

YAHYRW
Length:156
Mass (Da):18,016
Last modified:January 23, 2007 - v2
Checksum:iBC20C4487623B0E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81674.1.
RefSeqiWP_008633429.1. NC_005835.1.
YP_005301.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81674; AAS81674; TT_C1332.
KEGGitth:TTC1332.
PATRICi23953071. VBITheThe54392_1324.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81674.1.
RefSeqiWP_008633429.1. NC_005835.1.
YP_005301.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4KVBX-ray4.20G1-156[»]
4V4IX-ray3.71h1-156[»]
4V4JX-ray3.83h1-156[»]
4V5LX-ray3.10AG1-156[»]
4V63X-ray3.21AG/CG1-156[»]
4V67X-ray3.00AG/CG1-156[»]
4V7PX-ray3.62AG/DG2-156[»]
4V83X-ray3.50AG/CG2-156[»]
4V84X-ray3.40AG/CG2-156[»]
4V9JX-ray3.86AG/CG2-156[»]
4V9KX-ray3.50AG/CG2-156[»]
4V9LX-ray3.50AG/CG2-156[»]
4V9MX-ray4.00AG/CG2-156[»]
4V9NX-ray3.40AG/CG2-156[»]
4V9QX-ray3.40BG/DG2-156[»]
4W29X-ray3.80AG/CG2-156[»]
4XEJX-ray3.80AS07/BS072-156[»]
ProteinModelPortaliP62667.
SMRiP62667. Positions 2-156.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262724.TTC1332.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS81674; AAS81674; TT_C1332.
KEGGitth:TTC1332.
PATRICi23953071. VBITheThe54392_1324.

Phylogenomic databases

eggNOGiCOG0049.
KOiK02992.
OMAiEVHRMAD.
OrthoDBiEOG6P5ZKW.

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1347-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP62667.

Family and domain databases

Gene3Di1.10.455.10. 1 hit.
HAMAPiMF_00480_B. Ribosomal_S7_B.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRS7_THET2
AccessioniPrimary (citable) accession number: P62667
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: May 27, 2015
This is version 85 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.