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P62667

- RS7_THET2

UniProt

P62667 - RS7_THET2

Protein

30S ribosomal protein S7

Gene

rpsG

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 77 (01 Oct 2014)
      Sequence version 2 (23 Jan 2007)
      Previous versions | rss
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    Functioni

    One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA By similarity.By similarity

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro
    3. tRNA binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding, tRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1347-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S7
    Gene namesi
    Name:rpsG
    Synonyms:rps7
    Ordered Locus Names:TT_C1332
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 15615530S ribosomal protein S7PRO_0000124368Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Contacts proteins S9 and S11 By similarity.By similarity

    Protein-protein interaction databases

    STRINGi262724.TTC1332.

    Structurei

    Secondary structure

    1
    156
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi16 – 183
    Helixi21 – 3010
    Beta strandi32 – 343
    Helixi36 – 5318
    Beta strandi54 – 563
    Helixi58 – 6811
    Beta strandi72 – 809
    Beta strandi83 – 908
    Helixi93 – 11018
    Helixi116 – 12914
    Helixi133 – 14715
    Helixi148 – 1547

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2QNHX-ray3.83h1-156[»]
    3D5AX-ray3.21G1-156[»]
    3D5CX-ray3.21G1-156[»]
    3F1EX-ray3.00G1-156[»]
    3F1GX-ray3.00G1-156[»]
    3MR8X-ray3.62G2-156[»]
    3MS0X-ray3.62G2-156[»]
    3PYNX-ray3.50G2-156[»]
    3PYQX-ray3.50G2-156[»]
    3PYSX-ray3.40G2-156[»]
    3PYUX-ray3.40G2-156[»]
    4KBTX-ray3.86G2-156[»]
    4KBVX-ray3.86G2-156[»]
    4KCYX-ray3.50G2-156[»]
    4KD0X-ray3.50G2-156[»]
    4KD8X-ray3.50G2-156[»]
    4KDAX-ray3.50G2-156[»]
    4KDGX-ray4.00G2-156[»]
    4KDJX-ray4.00G2-156[»]
    4KFHX-ray3.40G2-156[»]
    4KFKX-ray3.40G2-156[»]
    4KVBX-ray4.20G1-156[»]
    4L6KX-ray3.40G2-156[»]
    4L6MX-ray3.40G2-156[»]
    ProteinModelPortaliP62667.
    SMRiP62667. Positions 2-156.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP62667.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S7P family.Curated

    Phylogenomic databases

    eggNOGiCOG0049.
    KOiK02992.
    OMAiVYRKAMS.
    OrthoDBiEOG6P5ZKW.

    Family and domain databases

    Gene3Di1.10.455.10. 1 hit.
    HAMAPiMF_00480_B. Ribosomal_S7_B.
    InterProiIPR000235. Ribosomal_S5/S7.
    IPR005717. Ribosomal_S7_bac/org-type.
    IPR020606. Ribosomal_S7_CS.
    IPR023798. Ribosomal_S7_dom.
    [Graphical view]
    PANTHERiPTHR11205. PTHR11205. 1 hit.
    PfamiPF00177. Ribosomal_S7. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
    SUPFAMiSSF47973. SSF47973. 1 hit.
    TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
    PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P62667-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARRRRAEVR QLQPDLVYGD VLVTAFINKI MRDGKKNLAA RIFYDACKII    50
    QEKTGQEPLK VFKQAVENVK PRMEVRSRRV GGANYQVPME VSPRRQQSLA 100
    LRWLVQAANQ RPERRAAVRI AHELMDAAEG KGGAVKKKED VERMAEANRA 150
    YAHYRW 156
    Length:156
    Mass (Da):18,016
    Last modified:January 23, 2007 - v2
    Checksum:iBC20C4487623B0E9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81674.1.
    RefSeqiYP_005301.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81674; AAS81674; TT_C1332.
    GeneIDi2776490.
    KEGGitth:TTC1332.
    PATRICi23953071. VBITheThe54392_1324.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81674.1 .
    RefSeqi YP_005301.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2QNH X-ray 3.83 h 1-156 [» ]
    3D5A X-ray 3.21 G 1-156 [» ]
    3D5C X-ray 3.21 G 1-156 [» ]
    3F1E X-ray 3.00 G 1-156 [» ]
    3F1G X-ray 3.00 G 1-156 [» ]
    3MR8 X-ray 3.62 G 2-156 [» ]
    3MS0 X-ray 3.62 G 2-156 [» ]
    3PYN X-ray 3.50 G 2-156 [» ]
    3PYQ X-ray 3.50 G 2-156 [» ]
    3PYS X-ray 3.40 G 2-156 [» ]
    3PYU X-ray 3.40 G 2-156 [» ]
    4KBT X-ray 3.86 G 2-156 [» ]
    4KBV X-ray 3.86 G 2-156 [» ]
    4KCY X-ray 3.50 G 2-156 [» ]
    4KD0 X-ray 3.50 G 2-156 [» ]
    4KD8 X-ray 3.50 G 2-156 [» ]
    4KDA X-ray 3.50 G 2-156 [» ]
    4KDG X-ray 4.00 G 2-156 [» ]
    4KDJ X-ray 4.00 G 2-156 [» ]
    4KFH X-ray 3.40 G 2-156 [» ]
    4KFK X-ray 3.40 G 2-156 [» ]
    4KVB X-ray 4.20 G 1-156 [» ]
    4L6K X-ray 3.40 G 2-156 [» ]
    4L6M X-ray 3.40 G 2-156 [» ]
    ProteinModelPortali P62667.
    SMRi P62667. Positions 2-156.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC1332.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81674 ; AAS81674 ; TT_C1332 .
    GeneIDi 2776490.
    KEGGi tth:TTC1332.
    PATRICi 23953071. VBITheThe54392_1324.

    Phylogenomic databases

    eggNOGi COG0049.
    KOi K02992.
    OMAi VYRKAMS.
    OrthoDBi EOG6P5ZKW.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1347-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P62667.

    Family and domain databases

    Gene3Di 1.10.455.10. 1 hit.
    HAMAPi MF_00480_B. Ribosomal_S7_B.
    InterProi IPR000235. Ribosomal_S5/S7.
    IPR005717. Ribosomal_S7_bac/org-type.
    IPR020606. Ribosomal_S7_CS.
    IPR023798. Ribosomal_S7_dom.
    [Graphical view ]
    PANTHERi PTHR11205. PTHR11205. 1 hit.
    Pfami PF00177. Ribosomal_S7. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
    SUPFAMi SSF47973. SSF47973. 1 hit.
    TIGRFAMsi TIGR01029. rpsG_bact. 1 hit.
    PROSITEi PS00052. RIBOSOMAL_S7. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRS7_THET2
    AccessioniPrimary (citable) accession number: P62667
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 19, 2004
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 77 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3