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Protein

30S ribosomal protein S7

Gene

rpsG

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding, tRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S7
Gene namesi
Name:rpsG
Synonyms:rps7
Ordered Locus Names:TT_C1332
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000592 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001243682 – 15630S ribosomal protein S7Add BLAST155

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S9 and S11 (By similarity).By similarity

Protein-protein interaction databases

STRINGi262724.TTC1332.

Structurei

Secondary structure

1156
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi16 – 18Combined sources3
Helixi21 – 30Combined sources10
Beta strandi32 – 34Combined sources3
Helixi36 – 53Combined sources18
Beta strandi54 – 56Combined sources3
Helixi58 – 68Combined sources11
Beta strandi72 – 80Combined sources9
Beta strandi83 – 90Combined sources8
Helixi93 – 110Combined sources18
Helixi116 – 129Combined sources14
Helixi133 – 147Combined sources15
Helixi148 – 154Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4KVBX-ray4.20G1-156[»]
4V4IX-ray3.71h1-156[»]
4V4JX-ray3.83h1-156[»]
4V5LX-ray3.10AG1-156[»]
4V63X-ray3.21AG/CG1-156[»]
4V67X-ray3.00AG/CG1-156[»]
4V7PX-ray3.62AG/DG2-156[»]
4V83X-ray3.50AG/CG2-156[»]
4V84X-ray3.40AG/CG2-156[»]
4V9JX-ray3.86AG/CG2-156[»]
4V9KX-ray3.50AG/CG2-156[»]
4V9LX-ray3.50AG/CG2-156[»]
4V9MX-ray4.00AG/CG2-156[»]
4V9NX-ray3.40AG/CG2-156[»]
4V9QX-ray3.40BG/DG2-156[»]
4W29X-ray3.80AG/CG2-156[»]
4XEJX-ray3.80AS07/BS072-156[»]
5J4DX-ray3.10PA/UC1-156[»]
ProteinModelPortaliP62667.
SMRiP62667.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP62667.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S7P family.Curated

Phylogenomic databases

eggNOGiENOG4108UHY. Bacteria.
COG0049. LUCA.
KOiK02992.
OMAiEVHRMAD.

Family and domain databases

Gene3Di1.10.455.10. 1 hit.
HAMAPiMF_00480_B. Ribosomal_S7_B. 1 hit.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62667-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARRRRAEVR QLQPDLVYGD VLVTAFINKI MRDGKKNLAA RIFYDACKII
60 70 80 90 100
QEKTGQEPLK VFKQAVENVK PRMEVRSRRV GGANYQVPME VSPRRQQSLA
110 120 130 140 150
LRWLVQAANQ RPERRAAVRI AHELMDAAEG KGGAVKKKED VERMAEANRA

YAHYRW
Length:156
Mass (Da):18,016
Last modified:January 23, 2007 - v2
Checksum:iBC20C4487623B0E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81674.1.
RefSeqiWP_008633429.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81674; AAS81674; TT_C1332.
KEGGitth:TT_C1332.
PATRICi23953071. VBITheThe54392_1324.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81674.1.
RefSeqiWP_008633429.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4KVBX-ray4.20G1-156[»]
4V4IX-ray3.71h1-156[»]
4V4JX-ray3.83h1-156[»]
4V5LX-ray3.10AG1-156[»]
4V63X-ray3.21AG/CG1-156[»]
4V67X-ray3.00AG/CG1-156[»]
4V7PX-ray3.62AG/DG2-156[»]
4V83X-ray3.50AG/CG2-156[»]
4V84X-ray3.40AG/CG2-156[»]
4V9JX-ray3.86AG/CG2-156[»]
4V9KX-ray3.50AG/CG2-156[»]
4V9LX-ray3.50AG/CG2-156[»]
4V9MX-ray4.00AG/CG2-156[»]
4V9NX-ray3.40AG/CG2-156[»]
4V9QX-ray3.40BG/DG2-156[»]
4W29X-ray3.80AG/CG2-156[»]
4XEJX-ray3.80AS07/BS072-156[»]
5J4DX-ray3.10PA/UC1-156[»]
ProteinModelPortaliP62667.
SMRiP62667.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262724.TTC1332.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS81674; AAS81674; TT_C1332.
KEGGitth:TT_C1332.
PATRICi23953071. VBITheThe54392_1324.

Phylogenomic databases

eggNOGiENOG4108UHY. Bacteria.
COG0049. LUCA.
KOiK02992.
OMAiEVHRMAD.

Miscellaneous databases

EvolutionaryTraceiP62667.

Family and domain databases

Gene3Di1.10.455.10. 1 hit.
HAMAPiMF_00480_B. Ribosomal_S7_B. 1 hit.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS7_THET2
AccessioniPrimary (citable) accession number: P62667
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: November 2, 2016
This is version 93 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.