Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P62666 (RS6_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S6
Gene names
Name:rpsF
Synonyms:rps6
Ordered Locus Names:TT_C1740
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length101 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Located on the outer edge of the platform on the body of the 30S subunit By similarity. HAMAP-Rule MF_00360

Subunit structure

Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S18 By similarity.

Sequence similarities

Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 10110130S ribosomal protein S6 HAMAP-Rule MF_00360
PRO_0000176862

Secondary structure

....................... 101
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P62666 [UniParc].

Last modified July 19, 2004. Version 1.
Checksum: 4FEE8005C74902E5

FASTA10111,973
        10         20         30         40         50         60 
MRRYEVNIVL NPNLDQSQLA LEKEIIQRAL ENYGARVEKV EELGLRRLAY PIAKDPQGYF 

        70         80         90        100 
LWYQVEMPED RVNDLARELR IRDNVRRVMV VKSQEPFLAN A 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS82082.1.
RefSeqYP_005709.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2QNHX-ray3.83g1-101[»]
3D5AX-ray3.21F1-101[»]
3D5CX-ray3.21F1-101[»]
3F1EX-ray3.00F1-101[»]
3F1GX-ray3.00F1-101[»]
3MR8X-ray3.62F1-101[»]
3MS0X-ray3.62F1-101[»]
3PYNX-ray3.50F1-101[»]
3PYQX-ray3.50F1-101[»]
3PYSX-ray3.40F1-101[»]
3PYUX-ray3.40F1-101[»]
4KBTX-ray3.86F1-101[»]
4KBVX-ray3.86F1-101[»]
4KCYX-ray3.50F1-101[»]
4KD0X-ray3.50F1-101[»]
4KD8X-ray3.50F1-101[»]
4KDAX-ray3.50F1-101[»]
4KDGX-ray4.00F1-101[»]
4KDJX-ray4.00F1-101[»]
4KFHX-ray3.40F1-101[»]
4KFKX-ray3.40F1-101[»]
4L6KX-ray3.40F1-101[»]
4L6MX-ray3.40F1-101[»]
ProteinModelPortalP62666.
SMRP62666. Positions 1-101.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS82082; AAS82082; TT_C1740.
GeneID2775242.
KEGGtth:TTC1740.
PATRIC23953947. VBITheThe54392_1739.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0360.
KOK02990.
OMAREGYYLM.
OrthoDBEOG6P33DH.
ProtClustDBPRK00453.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1778-MONOMER.

Family and domain databases

Gene3D3.30.70.60. 1 hit.
HAMAPMF_00360. Ribosomal_S6.
InterProIPR000529. Ribosomal_S6.
IPR020815. Ribosomal_S6_CS.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMSSF54995. SSF54995. 1 hit.
TIGRFAMsTIGR00166. S6. 1 hit.
PROSITEPS01048. RIBOSOMAL_S6. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP62666.

Entry information

Entry nameRS6_THET2
AccessionPrimary (citable) accession number: P62666
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: July 19, 2004
Last modified: February 19, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references