Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P62663

- RS3_THET2

UniProt

P62663 - RS3_THET2

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

30S ribosomal protein S3

Gene

rpsC

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation By similarity.By similarity

GO - Molecular functioni

  1. mRNA binding Source: UniProtKB-HAMAP
  2. rRNA binding Source: UniProtKB-HAMAP
  3. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1337-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S3
Gene namesi
Name:rpsC
Synonyms:rps3
Ordered Locus Names:TT_C1322
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. small ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 23923830S ribosomal protein S3PRO_0000130222Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14 By similarity.By similarity

Protein-protein interaction databases

STRINGi262724.TTC1322.

Structurei

Secondary structure

1
239
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi7 – 104Combined sources
Turni11 – 155Combined sources
Beta strandi19 – 224Combined sources
Turni26 – 283Combined sources
Helixi29 – 4517Combined sources
Helixi48 – 503Combined sources
Beta strandi52 – 554Combined sources
Beta strandi57 – 659Combined sources
Beta strandi68 – 714Combined sources
Helixi74 – 774Combined sources
Turni78 – 814Combined sources
Helixi83 – 9210Combined sources
Beta strandi95 – 984Combined sources
Beta strandi101 – 1055Combined sources
Helixi109 – 1113Combined sources
Helixi113 – 12513Combined sources
Helixi130 – 14314Combined sources
Beta strandi147 – 1559Combined sources
Helixi157 – 1593Combined sources
Beta strandi164 – 1663Combined sources
Beta strandi169 – 1713Combined sources
Beta strandi175 – 1784Combined sources
Beta strandi182 – 1876Combined sources
Beta strandi196 – 2038Combined sources

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2OW8X-ray3.71d1-239[»]
2QNHX-ray3.83d1-239[»]
3D5AX-ray3.21C1-239[»]
3D5CX-ray3.21C1-239[»]
3F1EX-ray3.00C1-239[»]
3F1GX-ray3.00C1-239[»]
3MR8X-ray3.62C2-207[»]
3MS0X-ray3.62C2-207[»]
3PYNX-ray3.50C2-207[»]
3PYQX-ray3.50C2-207[»]
3PYSX-ray3.40C2-207[»]
3PYUX-ray3.40C2-207[»]
4KBTX-ray3.86C2-208[»]
4KBVX-ray3.86C2-208[»]
4KCYX-ray3.50C2-208[»]
4KD0X-ray3.50C2-208[»]
4KD8X-ray3.50C2-208[»]
4KDAX-ray3.50C2-208[»]
4KDGX-ray4.00C2-208[»]
4KDJX-ray4.00C2-208[»]
4KFHX-ray3.40C2-207[»]
4KFKX-ray3.40C2-207[»]
4KVBX-ray4.20C1-239[»]
4L6KX-ray3.40C2-207[»]
4L6MX-ray3.40C2-207[»]
ProteinModelPortaliP62663.
SMRiP62663. Positions 2-207.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP62663.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini40 – 10869KH type-2Add
BLAST

Sequence similaritiesi

Belongs to the ribosomal protein S3P family.Curated
Contains 1 KH type-2 domain.Curated

Phylogenomic databases

eggNOGiCOG0092.
KOiK02982.
OMAiVEYAFTE.
OrthoDBiEOG6K13X3.

Family and domain databases

Gene3Di3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPiMF_01309_B. Ribosomal_S3_B.
InterProiIPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR018280. Ribosomal_S3_CS.
[Graphical view]
PfamiPF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view]
SMARTiSM00322. KH. 1 hit.
[Graphical view]
SUPFAMiSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsiTIGR01009. rpsC_bact. 1 hit.
PROSITEiPS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62663-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGNKIHPIGF RLGITRDWES RWYAGKKQYR HLLLEDQRIR GLLEKELYSA
60 70 80 90 100
GLARVDIERA ADNVAVTVHV AKPGVVIGRG GERIRVLREE LAKLTGKNVA
110 120 130 140 150
LNVQEVQNPN LSAPLVAQRV AEQIERRFAV RRAIKQAVQR VMESGAKGAK
160 170 180 190 200
VIVSGRIGGA EQARTEWAAQ GRVPLHTLRA NIDYGFALAR TTYGVLGVKA
210 220 230
YIFLGEVIGG QKPKARPELP KAEERPRRRR PAVRVKKEE
Length:239
Mass (Da):26,701
Last modified:January 23, 2007 - v2
Checksum:iAD585A1D53AC7F04
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ409330 Genomic DNA. Translation: CAC35062.1.
AE017221 Genomic DNA. Translation: AAS81664.1.
RefSeqiYP_005291.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81664; AAS81664; TT_C1322.
GeneIDi2775806.
KEGGitth:TTC1322.
PATRICi23953051. VBITheThe54392_1314.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ409330 Genomic DNA. Translation: CAC35062.1 .
AE017221 Genomic DNA. Translation: AAS81664.1 .
RefSeqi YP_005291.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2OW8 X-ray 3.71 d 1-239 [» ]
2QNH X-ray 3.83 d 1-239 [» ]
3D5A X-ray 3.21 C 1-239 [» ]
3D5C X-ray 3.21 C 1-239 [» ]
3F1E X-ray 3.00 C 1-239 [» ]
3F1G X-ray 3.00 C 1-239 [» ]
3MR8 X-ray 3.62 C 2-207 [» ]
3MS0 X-ray 3.62 C 2-207 [» ]
3PYN X-ray 3.50 C 2-207 [» ]
3PYQ X-ray 3.50 C 2-207 [» ]
3PYS X-ray 3.40 C 2-207 [» ]
3PYU X-ray 3.40 C 2-207 [» ]
4KBT X-ray 3.86 C 2-208 [» ]
4KBV X-ray 3.86 C 2-208 [» ]
4KCY X-ray 3.50 C 2-208 [» ]
4KD0 X-ray 3.50 C 2-208 [» ]
4KD8 X-ray 3.50 C 2-208 [» ]
4KDA X-ray 3.50 C 2-208 [» ]
4KDG X-ray 4.00 C 2-208 [» ]
4KDJ X-ray 4.00 C 2-208 [» ]
4KFH X-ray 3.40 C 2-207 [» ]
4KFK X-ray 3.40 C 2-207 [» ]
4KVB X-ray 4.20 C 1-239 [» ]
4L6K X-ray 3.40 C 2-207 [» ]
4L6M X-ray 3.40 C 2-207 [» ]
ProteinModelPortali P62663.
SMRi P62663. Positions 2-207.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC1322.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81664 ; AAS81664 ; TT_C1322 .
GeneIDi 2775806.
KEGGi tth:TTC1322.
PATRICi 23953051. VBITheThe54392_1314.

Phylogenomic databases

eggNOGi COG0092.
KOi K02982.
OMAi VEYAFTE.
OrthoDBi EOG6K13X3.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1337-MONOMER.

Miscellaneous databases

EvolutionaryTracei P62663.

Family and domain databases

Gene3Di 3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPi MF_01309_B. Ribosomal_S3_B.
InterProi IPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR018280. Ribosomal_S3_CS.
[Graphical view ]
Pfami PF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view ]
SMARTi SM00322. KH. 1 hit.
[Graphical view ]
SUPFAMi SSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsi TIGR01009. rpsC_bact. 1 hit.
PROSITEi PS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
    Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
    EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRS3_THET2
AccessioniPrimary (citable) accession number: P62663
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: October 29, 2014
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3