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P62662 (RS2_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S2
Gene names
Name:rpsB
Synonyms:rps2
Ordered Locus Names:TT_C0509
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length256 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit By similarity. HAMAP-Rule MF_00291_B

Subunit structure

Part of the 30S ribosomal subunit. Contacts protein S8 By similarity.

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
   DomainCoiled coil
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentsmall ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 25625530S ribosomal protein S2 HAMAP-Rule MF_00291_B
PRO_0000134263

Regions

Coiled coil104 – 14946 HAMAP-Rule MF_00291_B

Secondary structure

............................................... 256
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P62662 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 65D7958336911CE5

FASTA25629,277
        10         20         30         40         50         60 
MPVEITVKEL LEAGVHFGHE RKRWNPKFAR YIYAERNGIH IIDLQKTMEE LERTFRFIED 

        70         80         90        100        110        120 
LAMRGGTILF VGTKKQAQDI VRMEAERAGM PYVNQRWLGG MLTNFKTISQ RVHRLEELEA 

       130        140        150        160        170        180 
LFASPEIEER PKKEQVRLKH ELERLQKYLS GFRLLKRLPD AIFVVDPTKE AIAVREARKL 

       190        200        210        220        230        240 
FIPVIALADT DSDPDLVDYI IPGNDDAIRS IQLILSRAVD LIIQARGGVV EPSPSYALVQ 

       250 
EAEATETPEG ESEVEA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ409329 Genomic DNA. Translation: CAC35061.1.
AE017221 Genomic DNA. Translation: AAS80857.1.
RefSeqYP_004484.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1VOZX-ray11.50B7-240[»]
2OW8X-ray3.71c1-256[»]
2QNHX-ray3.83c1-256[»]
3D5AX-ray3.21B1-256[»]
3D5CX-ray3.21B1-256[»]
3F1EX-ray3.00B1-256[»]
3F1GX-ray3.00B1-256[»]
3MR8X-ray3.62B7-240[»]
3MS0X-ray3.62B7-240[»]
3PYNX-ray3.50B7-240[»]
3PYQX-ray3.50B7-240[»]
3PYSX-ray3.40B7-240[»]
3PYUX-ray3.40B7-240[»]
4KBTX-ray3.86B7-241[»]
4KBVX-ray3.86B7-241[»]
4KCYX-ray3.50B7-241[»]
4KD0X-ray3.50B7-241[»]
4KD8X-ray3.50B7-241[»]
4KDAX-ray3.50B7-241[»]
4KDGX-ray4.00B7-241[»]
4KDJX-ray4.00B7-241[»]
4KFHX-ray3.40B7-240[»]
4KFKX-ray3.40B7-240[»]
4L6KX-ray3.40B7-240[»]
4L6MX-ray3.40B7-240[»]
ProteinModelPortalP62662.
SMRP62662. Positions 2-250.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC0509.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS80857; AAS80857; TT_C0509.
GeneID2775858.
KEGGtth:TTC0509.
PATRIC23951423. VBITheThe54392_0509.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0052.
KOK02967.
OMAAYQSDEN.
OrthoDBEOG6XWV6P.
ProtClustDBPRK05299.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-520-MONOMER.

Family and domain databases

HAMAPMF_00291_B. Ribosomal_S2_B.
InterProIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERPTHR12534. PTHR12534. 1 hit.
PfamPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSPR00395. RIBOSOMALS2.
SUPFAMSSF52313. SSF52313. 1 hit.
TIGRFAMsTIGR01011. rpsB_bact. 1 hit.
PROSITEPS00962. RIBOSOMAL_S2_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP62662.

Entry information

Entry nameRS2_THET2
AccessionPrimary (citable) accession number: P62662
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: February 19, 2014
This is version 75 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references