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P62661

- RS20_THET2

UniProt

P62661 - RS20_THET2

Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Binds directly to 16S ribosomal RNA.By similarity

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1043-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S20
    Gene namesi
    Name:rpsT
    Synonyms:rps20
    Ordered Locus Names:TT_C1031
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 10610530S ribosomal protein S20PRO_0000168049Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi262724.TTC1031.

    Structurei

    Secondary structure

    1
    106
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi13 – 4533
    Helixi49 – 6618
    Turni67 – 704
    Helixi76 – 9217
    Turni93 – 953
    Beta strandi100 – 1045

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1TWTmodel-W1-106[»]
    1VOXX-ray11.50T8-106[»]
    2OW8X-ray3.71u1-106[»]
    2QNHX-ray3.83u1-106[»]
    2UXBX-ray3.10T1-106[»]
    2UXCX-ray2.90T1-106[»]
    2UXDX-ray3.20T1-106[»]
    2VQEX-ray2.50T1-106[»]
    2VQFX-ray2.90T1-106[»]
    3D5AX-ray3.21T1-106[»]
    3D5CX-ray3.21T1-106[»]
    3F1EX-ray3.00T1-106[»]
    3F1GX-ray3.00T1-106[»]
    3MR8X-ray3.62T8-106[»]
    3MS0X-ray3.62T8-106[»]
    3PYNX-ray3.50T8-106[»]
    3PYQX-ray3.50T8-106[»]
    3PYSX-ray3.40T8-106[»]
    3PYUX-ray3.40T8-106[»]
    3T1HX-ray3.11T1-106[»]
    3T1YX-ray2.80T1-106[»]
    4KBTX-ray3.86T8-106[»]
    4KBVX-ray3.86T8-106[»]
    4KCYX-ray3.50T8-106[»]
    4KD0X-ray3.50T8-106[»]
    4KD8X-ray3.50T8-106[»]
    4KDAX-ray3.50T8-106[»]
    4KDGX-ray4.00T8-106[»]
    4KDJX-ray4.00T8-106[»]
    4KFHX-ray3.40T8-106[»]
    4KFKX-ray3.40T8-106[»]
    4KVBX-ray4.20T1-106[»]
    4L6KX-ray3.40T8-106[»]
    4L6MX-ray3.40T8-106[»]
    ProteinModelPortaliP62661.
    SMRiP62661. Positions 8-106.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP62661.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S20P family.Curated

    Phylogenomic databases

    eggNOGiCOG0268.
    KOiK02968.
    OMAiARASIHQ.
    OrthoDBiEOG6HMXNQ.

    Family and domain databases

    Gene3Di1.20.58.110. 1 hit.
    HAMAPiMF_00500. Ribosomal_S20.
    InterProiIPR002583. Ribosomal_S20.
    [Graphical view]
    PfamiPF01649. Ribosomal_S20p. 1 hit.
    [Graphical view]
    ProDomiPD004231. Ribosomal_S20. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF46992. SSF46992. 1 hit.
    TIGRFAMsiTIGR00029. S20. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P62661-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAQKKPKRNL SALKRHRQSL KRRLRNKAKK SAIKTLSKKA VQLAQEGKAE    50
    EALKIMRKAE SLIDKAAKGS TLHKNAAARR KSRLMRKVRQ LLEAAGAPLI 100
    GGGLSA 106
    Length:106
    Mass (Da):11,689
    Last modified:January 23, 2007 - v2
    Checksum:iBEEFCB635DF365E8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81373.1.
    RefSeqiYP_005000.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81373; AAS81373; TT_C1031.
    GeneIDi2774796.
    KEGGitth:TTC1031.
    PATRICi23952463. VBITheThe54392_1022.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81373.1 .
    RefSeqi YP_005000.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1TWT model - W 1-106 [» ]
    1VOX X-ray 11.50 T 8-106 [» ]
    2OW8 X-ray 3.71 u 1-106 [» ]
    2QNH X-ray 3.83 u 1-106 [» ]
    2UXB X-ray 3.10 T 1-106 [» ]
    2UXC X-ray 2.90 T 1-106 [» ]
    2UXD X-ray 3.20 T 1-106 [» ]
    2VQE X-ray 2.50 T 1-106 [» ]
    2VQF X-ray 2.90 T 1-106 [» ]
    3D5A X-ray 3.21 T 1-106 [» ]
    3D5C X-ray 3.21 T 1-106 [» ]
    3F1E X-ray 3.00 T 1-106 [» ]
    3F1G X-ray 3.00 T 1-106 [» ]
    3MR8 X-ray 3.62 T 8-106 [» ]
    3MS0 X-ray 3.62 T 8-106 [» ]
    3PYN X-ray 3.50 T 8-106 [» ]
    3PYQ X-ray 3.50 T 8-106 [» ]
    3PYS X-ray 3.40 T 8-106 [» ]
    3PYU X-ray 3.40 T 8-106 [» ]
    3T1H X-ray 3.11 T 1-106 [» ]
    3T1Y X-ray 2.80 T 1-106 [» ]
    4KBT X-ray 3.86 T 8-106 [» ]
    4KBV X-ray 3.86 T 8-106 [» ]
    4KCY X-ray 3.50 T 8-106 [» ]
    4KD0 X-ray 3.50 T 8-106 [» ]
    4KD8 X-ray 3.50 T 8-106 [» ]
    4KDA X-ray 3.50 T 8-106 [» ]
    4KDG X-ray 4.00 T 8-106 [» ]
    4KDJ X-ray 4.00 T 8-106 [» ]
    4KFH X-ray 3.40 T 8-106 [» ]
    4KFK X-ray 3.40 T 8-106 [» ]
    4KVB X-ray 4.20 T 1-106 [» ]
    4L6K X-ray 3.40 T 8-106 [» ]
    4L6M X-ray 3.40 T 8-106 [» ]
    ProteinModelPortali P62661.
    SMRi P62661. Positions 8-106.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC1031.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81373 ; AAS81373 ; TT_C1031 .
    GeneIDi 2774796.
    KEGGi tth:TTC1031.
    PATRICi 23952463. VBITheThe54392_1022.

    Phylogenomic databases

    eggNOGi COG0268.
    KOi K02968.
    OMAi ARASIHQ.
    OrthoDBi EOG6HMXNQ.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1043-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P62661.

    Family and domain databases

    Gene3Di 1.20.58.110. 1 hit.
    HAMAPi MF_00500. Ribosomal_S20.
    InterProi IPR002583. Ribosomal_S20.
    [Graphical view ]
    Pfami PF01649. Ribosomal_S20p. 1 hit.
    [Graphical view ]
    ProDomi PD004231. Ribosomal_S20. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF46992. SSF46992. 1 hit.
    TIGRFAMsi TIGR00029. S20. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRS20_THET2
    AccessioniPrimary (citable) accession number: P62661
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 19, 2004
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 78 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3