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P62661

- RS20_THET2

UniProt

P62661 - RS20_THET2

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Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Binds directly to 16S ribosomal RNA.By similarity

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1043-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S20
Gene namesi
Name:rpsT
Synonyms:rps20
Ordered Locus Names:TT_C1031
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 10610530S ribosomal protein S20PRO_0000168049Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC1031.

Structurei

Secondary structure

1
106
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi13 – 4533Combined sources
Helixi49 – 6618Combined sources
Turni67 – 704Combined sources
Helixi76 – 9217Combined sources
Turni93 – 953Combined sources
Beta strandi100 – 1045Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TWTmodel-W1-106[»]
1VOXX-ray11.50T8-106[»]
2OW8X-ray3.71u1-106[»]
2QNHX-ray3.83u1-106[»]
2UXBX-ray3.10T1-106[»]
2UXCX-ray2.90T1-106[»]
2UXDX-ray3.20T1-106[»]
2VQEX-ray2.50T1-106[»]
2VQFX-ray2.90T1-106[»]
3D5AX-ray3.21T1-106[»]
3D5CX-ray3.21T1-106[»]
3F1EX-ray3.00T1-106[»]
3F1GX-ray3.00T1-106[»]
3MR8X-ray3.62T8-106[»]
3MS0X-ray3.62T8-106[»]
3PYNX-ray3.50T8-106[»]
3PYQX-ray3.50T8-106[»]
3PYSX-ray3.40T8-106[»]
3PYUX-ray3.40T8-106[»]
3T1HX-ray3.11T1-106[»]
3T1YX-ray2.80T1-106[»]
4KBTX-ray3.86T8-106[»]
4KBVX-ray3.86T8-106[»]
4KCYX-ray3.50T8-106[»]
4KD0X-ray3.50T8-106[»]
4KD8X-ray3.50T8-106[»]
4KDAX-ray3.50T8-106[»]
4KDGX-ray4.00T8-106[»]
4KDJX-ray4.00T8-106[»]
4KFHX-ray3.40T8-106[»]
4KFKX-ray3.40T8-106[»]
4KVBX-ray4.20T1-106[»]
4L6KX-ray3.40T8-106[»]
4L6MX-ray3.40T8-106[»]
4QS0X-ray3.80T8-106[»]
4QS2X-ray3.80T8-106[»]
ProteinModelPortaliP62661.
SMRiP62661. Positions 8-106.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP62661.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S20P family.Curated

Phylogenomic databases

eggNOGiCOG0268.
KOiK02968.
OMAiARASIHQ.
OrthoDBiEOG6HMXNQ.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20.
InterProiIPR002583. Ribosomal_S20.
[Graphical view]
PfamiPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomiPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62661-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAQKKPKRNL SALKRHRQSL KRRLRNKAKK SAIKTLSKKA VQLAQEGKAE
60 70 80 90 100
EALKIMRKAE SLIDKAAKGS TLHKNAAARR KSRLMRKVRQ LLEAAGAPLI

GGGLSA
Length:106
Mass (Da):11,689
Last modified:January 23, 2007 - v2
Checksum:iBEEFCB635DF365E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81373.1.
RefSeqiYP_005000.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81373; AAS81373; TT_C1031.
GeneIDi2774796.
KEGGitth:TTC1031.
PATRICi23952463. VBITheThe54392_1022.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81373.1 .
RefSeqi YP_005000.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1TWT model - W 1-106 [» ]
1VOX X-ray 11.50 T 8-106 [» ]
2OW8 X-ray 3.71 u 1-106 [» ]
2QNH X-ray 3.83 u 1-106 [» ]
2UXB X-ray 3.10 T 1-106 [» ]
2UXC X-ray 2.90 T 1-106 [» ]
2UXD X-ray 3.20 T 1-106 [» ]
2VQE X-ray 2.50 T 1-106 [» ]
2VQF X-ray 2.90 T 1-106 [» ]
3D5A X-ray 3.21 T 1-106 [» ]
3D5C X-ray 3.21 T 1-106 [» ]
3F1E X-ray 3.00 T 1-106 [» ]
3F1G X-ray 3.00 T 1-106 [» ]
3MR8 X-ray 3.62 T 8-106 [» ]
3MS0 X-ray 3.62 T 8-106 [» ]
3PYN X-ray 3.50 T 8-106 [» ]
3PYQ X-ray 3.50 T 8-106 [» ]
3PYS X-ray 3.40 T 8-106 [» ]
3PYU X-ray 3.40 T 8-106 [» ]
3T1H X-ray 3.11 T 1-106 [» ]
3T1Y X-ray 2.80 T 1-106 [» ]
4KBT X-ray 3.86 T 8-106 [» ]
4KBV X-ray 3.86 T 8-106 [» ]
4KCY X-ray 3.50 T 8-106 [» ]
4KD0 X-ray 3.50 T 8-106 [» ]
4KD8 X-ray 3.50 T 8-106 [» ]
4KDA X-ray 3.50 T 8-106 [» ]
4KDG X-ray 4.00 T 8-106 [» ]
4KDJ X-ray 4.00 T 8-106 [» ]
4KFH X-ray 3.40 T 8-106 [» ]
4KFK X-ray 3.40 T 8-106 [» ]
4KVB X-ray 4.20 T 1-106 [» ]
4L6K X-ray 3.40 T 8-106 [» ]
4L6M X-ray 3.40 T 8-106 [» ]
4QS0 X-ray 3.80 T 8-106 [» ]
4QS2 X-ray 3.80 T 8-106 [» ]
ProteinModelPortali P62661.
SMRi P62661. Positions 8-106.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC1031.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81373 ; AAS81373 ; TT_C1031 .
GeneIDi 2774796.
KEGGi tth:TTC1031.
PATRICi 23952463. VBITheThe54392_1022.

Phylogenomic databases

eggNOGi COG0268.
KOi K02968.
OMAi ARASIHQ.
OrthoDBi EOG6HMXNQ.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1043-MONOMER.

Miscellaneous databases

EvolutionaryTracei P62661.

Family and domain databases

Gene3Di 1.20.58.110. 1 hit.
HAMAPi MF_00500. Ribosomal_S20.
InterProi IPR002583. Ribosomal_S20.
[Graphical view ]
Pfami PF01649. Ribosomal_S20p. 1 hit.
[Graphical view ]
ProDomi PD004231. Ribosomal_S20. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF46992. SSF46992. 1 hit.
TIGRFAMsi TIGR00029. S20. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRS20_THET2
AccessioniPrimary (citable) accession number: P62661
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: November 26, 2014
This is version 80 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3