Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P62661 (RS20_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S20
Gene names
Name:rpsT
Synonyms:rps20
Ordered Locus Names:TT_C1031
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length106 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Binds directly to 16S ribosomal RNA By similarity. HAMAP-Rule MF_00500

Sequence similarities

Belongs to the ribosomal protein S20P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 10610530S ribosomal protein S20 HAMAP-Rule MF_00500
PRO_0000168049

Secondary structure

........... 106
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P62661 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: BEEFCB635DF365E8

FASTA10611,689
        10         20         30         40         50         60 
MAQKKPKRNL SALKRHRQSL KRRLRNKAKK SAIKTLSKKA VQLAQEGKAE EALKIMRKAE 

        70         80         90        100 
SLIDKAAKGS TLHKNAAARR KSRLMRKVRQ LLEAAGAPLI GGGLSA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS81373.1.
RefSeqYP_005000.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1TWTmodel-W1-106[»]
1VOXX-ray11.50T8-106[»]
2OW8X-ray3.71u1-106[»]
2QNHX-ray3.83u1-106[»]
2UXBX-ray3.10T1-106[»]
2UXCX-ray2.90T1-106[»]
2UXDX-ray3.20T1-106[»]
2VQEX-ray2.50T1-106[»]
2VQFX-ray2.90T1-106[»]
3D5AX-ray3.21T1-106[»]
3D5CX-ray3.21T1-106[»]
3F1EX-ray3.00T1-106[»]
3F1GX-ray3.00T1-106[»]
3MR8X-ray3.62T8-106[»]
3MS0X-ray3.62T8-106[»]
3PYNX-ray3.50T8-106[»]
3PYQX-ray3.50T8-106[»]
3PYSX-ray3.40T8-106[»]
3PYUX-ray3.40T8-106[»]
3T1HX-ray3.11T1-106[»]
3T1YX-ray2.80T1-106[»]
4KBTX-ray3.86T8-106[»]
4KBVX-ray3.86T8-106[»]
4KCYX-ray3.50T8-106[»]
4KD0X-ray3.50T8-106[»]
4KD8X-ray3.50T8-106[»]
4KDAX-ray3.50T8-106[»]
4KDGX-ray4.00T8-106[»]
4KDJX-ray4.00T8-106[»]
4KFHX-ray3.40T8-106[»]
4KFKX-ray3.40T8-106[»]
4L6KX-ray3.40T8-106[»]
4L6MX-ray3.40T8-106[»]
ProteinModelPortalP62661.
SMRP62661. Positions 8-106.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC1031.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS81373; AAS81373; TT_C1031.
GeneID2774796.
KEGGtth:TTC1031.
PATRIC23952463. VBITheThe54392_1022.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0268.
KOK02968.
OMARTAIKQV.
OrthoDBEOG6HMXNQ.
ProtClustDBPRK00239.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1043-MONOMER.

Family and domain databases

Gene3D1.20.58.110. 1 hit.
HAMAPMF_00500. Ribosomal_S20.
InterProIPR002583. Ribosomal_S20.
[Graphical view]
PfamPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF46992. SSF46992. 1 hit.
TIGRFAMsTIGR00029. S20. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceP62661.

Entry information

Entry nameRS20_THET2
AccessionPrimary (citable) accession number: P62661
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: February 19, 2014
This is version 75 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references