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P62660

- RS19_THET2

UniProt

P62660 - RS19_THET2

Protein

30S ribosomal protein S19

Gene

rpsS

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.By similarity

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1339-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S19
    Gene namesi
    Name:rpsS
    Synonyms:rps19
    Ordered Locus Names:TT_C1324
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 939230S ribosomal protein S19PRO_0000129926Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi262724.TTC1324.

    Structurei

    Secondary structure

    1
    93
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi6 – 83
    Helixi13 – 2513
    Beta strandi30 – 323
    Beta strandi37 – 393
    Helixi42 – 443
    Beta strandi48 – 525
    Beta strandi54 – 563
    Beta strandi57 – 615
    Beta strandi63 – 664
    Beta strandi68 – 714
    Helixi72 – 743

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1VOQX-ray11.50S2-81[»]
    1VOSX-ray11.50S2-81[»]
    1VOVX-ray11.50S2-81[»]
    2OW8X-ray3.71t1-93[»]
    2QNHX-ray3.83t1-93[»]
    3D5AX-ray3.21S1-93[»]
    3D5CX-ray3.21S1-93[»]
    3F1EX-ray3.00S1-93[»]
    3F1GX-ray3.00S1-93[»]
    3MR8X-ray3.62S4-81[»]
    3MS0X-ray3.62S4-81[»]
    3PYNX-ray3.50S4-81[»]
    3PYQX-ray3.50S4-81[»]
    3PYSX-ray3.40S4-81[»]
    3PYUX-ray3.40S4-81[»]
    4KBTX-ray3.86S4-82[»]
    4KBVX-ray3.86S4-82[»]
    4KCYX-ray3.50S4-82[»]
    4KD0X-ray3.50S4-82[»]
    4KD8X-ray3.50S4-82[»]
    4KDAX-ray3.50S4-82[»]
    4KDGX-ray4.00S4-82[»]
    4KDJX-ray4.00S4-82[»]
    4KFHX-ray3.40S4-81[»]
    4KFKX-ray3.40S4-81[»]
    4KVBX-ray4.20S1-93[»]
    4L6KX-ray3.40S4-81[»]
    4L6MX-ray3.40S4-81[»]
    ProteinModelPortaliP62660.
    SMRiP62660. Positions 2-88.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP62660.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S19P family.Curated

    Phylogenomic databases

    eggNOGiCOG0185.
    KOiK02965.
    OMAiISPEFVG.
    OrthoDBiEOG61S365.

    Family and domain databases

    Gene3Di3.30.860.10. 1 hit.
    HAMAPiMF_00531. Ribosomal_S19.
    InterProiIPR002222. Ribosomal_S19.
    IPR005732. Ribosomal_S19_bac-type.
    IPR020934. Ribosomal_S19_CS.
    IPR023575. Ribosomal_S19_SF.
    [Graphical view]
    PANTHERiPTHR11880. PTHR11880. 1 hit.
    PfamiPF00203. Ribosomal_S19. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
    PRINTSiPR00975. RIBOSOMALS19.
    SUPFAMiSSF54570. SSF54570. 1 hit.
    TIGRFAMsiTIGR01050. rpsS_bact. 1 hit.
    PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P62660-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPRSLKKGVF VDDHLLEKVL ELNAKGEKRL IKTWSRRSTI VPEMVGHTIA   50
    VYNGKQHVPV YITENMVGHK LGEFAPTRTY RGHGKEAKAT KKK 93
    Length:93
    Mass (Da):10,581
    Last modified:January 23, 2007 - v2
    Checksum:iD77C0FC2D4D2DE04
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81666.1.
    RefSeqiYP_005293.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81666; AAS81666; TT_C1324.
    GeneIDi2775749.
    KEGGitth:TTC1324.
    PATRICi23953055. VBITheThe54392_1316.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81666.1 .
    RefSeqi YP_005293.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1VOQ X-ray 11.50 S 2-81 [» ]
    1VOS X-ray 11.50 S 2-81 [» ]
    1VOV X-ray 11.50 S 2-81 [» ]
    2OW8 X-ray 3.71 t 1-93 [» ]
    2QNH X-ray 3.83 t 1-93 [» ]
    3D5A X-ray 3.21 S 1-93 [» ]
    3D5C X-ray 3.21 S 1-93 [» ]
    3F1E X-ray 3.00 S 1-93 [» ]
    3F1G X-ray 3.00 S 1-93 [» ]
    3MR8 X-ray 3.62 S 4-81 [» ]
    3MS0 X-ray 3.62 S 4-81 [» ]
    3PYN X-ray 3.50 S 4-81 [» ]
    3PYQ X-ray 3.50 S 4-81 [» ]
    3PYS X-ray 3.40 S 4-81 [» ]
    3PYU X-ray 3.40 S 4-81 [» ]
    4KBT X-ray 3.86 S 4-82 [» ]
    4KBV X-ray 3.86 S 4-82 [» ]
    4KCY X-ray 3.50 S 4-82 [» ]
    4KD0 X-ray 3.50 S 4-82 [» ]
    4KD8 X-ray 3.50 S 4-82 [» ]
    4KDA X-ray 3.50 S 4-82 [» ]
    4KDG X-ray 4.00 S 4-82 [» ]
    4KDJ X-ray 4.00 S 4-82 [» ]
    4KFH X-ray 3.40 S 4-81 [» ]
    4KFK X-ray 3.40 S 4-81 [» ]
    4KVB X-ray 4.20 S 1-93 [» ]
    4L6K X-ray 3.40 S 4-81 [» ]
    4L6M X-ray 3.40 S 4-81 [» ]
    ProteinModelPortali P62660.
    SMRi P62660. Positions 2-88.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC1324.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81666 ; AAS81666 ; TT_C1324 .
    GeneIDi 2775749.
    KEGGi tth:TTC1324.
    PATRICi 23953055. VBITheThe54392_1316.

    Phylogenomic databases

    eggNOGi COG0185.
    KOi K02965.
    OMAi ISPEFVG.
    OrthoDBi EOG61S365.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1339-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P62660.

    Family and domain databases

    Gene3Di 3.30.860.10. 1 hit.
    HAMAPi MF_00531. Ribosomal_S19.
    InterProi IPR002222. Ribosomal_S19.
    IPR005732. Ribosomal_S19_bac-type.
    IPR020934. Ribosomal_S19_CS.
    IPR023575. Ribosomal_S19_SF.
    [Graphical view ]
    PANTHERi PTHR11880. PTHR11880. 1 hit.
    Pfami PF00203. Ribosomal_S19. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002144. Ribosomal_S19. 1 hit.
    PRINTSi PR00975. RIBOSOMALS19.
    SUPFAMi SSF54570. SSF54570. 1 hit.
    TIGRFAMsi TIGR01050. rpsS_bact. 1 hit.
    PROSITEi PS00323. RIBOSOMAL_S19. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRS19_THET2
    AccessioniPrimary (citable) accession number: P62660
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 19, 2004
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 82 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3