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P62660

- RS19_THET2

UniProt

P62660 - RS19_THET2

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Protein

30S ribosomal protein S19

Gene
rpsS, rps19, TT_C1324
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1339-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S19
Gene namesi
Name:rpsS
Synonyms:rps19
Ordered Locus Names:TT_C1324
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. small ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 939230S ribosomal protein S19UniRule annotationPRO_0000129926Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC1324.

Structurei

Secondary structure

1
93
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi6 – 83
Helixi13 – 2513
Beta strandi30 – 323
Beta strandi37 – 393
Helixi42 – 443
Beta strandi48 – 525
Beta strandi54 – 563
Beta strandi57 – 615
Beta strandi63 – 664
Beta strandi68 – 714
Helixi72 – 743

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VOQX-ray11.50S2-81[»]
1VOSX-ray11.50S2-81[»]
1VOVX-ray11.50S2-81[»]
2OW8X-ray3.71t1-93[»]
2QNHX-ray3.83t1-93[»]
3D5AX-ray3.21S1-93[»]
3D5CX-ray3.21S1-93[»]
3F1EX-ray3.00S1-93[»]
3F1GX-ray3.00S1-93[»]
3MR8X-ray3.62S4-81[»]
3MS0X-ray3.62S4-81[»]
3PYNX-ray3.50S4-81[»]
3PYQX-ray3.50S4-81[»]
3PYSX-ray3.40S4-81[»]
3PYUX-ray3.40S4-81[»]
4KBTX-ray3.86S4-82[»]
4KBVX-ray3.86S4-82[»]
4KCYX-ray3.50S4-82[»]
4KD0X-ray3.50S4-82[»]
4KD8X-ray3.50S4-82[»]
4KDAX-ray3.50S4-82[»]
4KDGX-ray4.00S4-82[»]
4KDJX-ray4.00S4-82[»]
4KFHX-ray3.40S4-81[»]
4KFKX-ray3.40S4-81[»]
4KVBX-ray4.20S1-93[»]
4L6KX-ray3.40S4-81[»]
4L6MX-ray3.40S4-81[»]
ProteinModelPortaliP62660.
SMRiP62660. Positions 2-88.

Miscellaneous databases

EvolutionaryTraceiP62660.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0185.
KOiK02965.
OMAiISPEFVG.
OrthoDBiEOG61S365.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19.
InterProiIPR002222. Ribosomal_S19.
IPR005732. Ribosomal_S19_bac-type.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
[Graphical view]
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiPF00203. Ribosomal_S19. 1 hit.
[Graphical view]
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01050. rpsS_bact. 1 hit.
PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62660-1 [UniParc]FASTAAdd to Basket

« Hide

MPRSLKKGVF VDDHLLEKVL ELNAKGEKRL IKTWSRRSTI VPEMVGHTIA   50
VYNGKQHVPV YITENMVGHK LGEFAPTRTY RGHGKEAKAT KKK 93
Length:93
Mass (Da):10,581
Last modified:January 23, 2007 - v2
Checksum:iD77C0FC2D4D2DE04
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81666.1.
RefSeqiYP_005293.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81666; AAS81666; TT_C1324.
GeneIDi2775749.
KEGGitth:TTC1324.
PATRICi23953055. VBITheThe54392_1316.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81666.1 .
RefSeqi YP_005293.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VOQ X-ray 11.50 S 2-81 [» ]
1VOS X-ray 11.50 S 2-81 [» ]
1VOV X-ray 11.50 S 2-81 [» ]
2OW8 X-ray 3.71 t 1-93 [» ]
2QNH X-ray 3.83 t 1-93 [» ]
3D5A X-ray 3.21 S 1-93 [» ]
3D5C X-ray 3.21 S 1-93 [» ]
3F1E X-ray 3.00 S 1-93 [» ]
3F1G X-ray 3.00 S 1-93 [» ]
3MR8 X-ray 3.62 S 4-81 [» ]
3MS0 X-ray 3.62 S 4-81 [» ]
3PYN X-ray 3.50 S 4-81 [» ]
3PYQ X-ray 3.50 S 4-81 [» ]
3PYS X-ray 3.40 S 4-81 [» ]
3PYU X-ray 3.40 S 4-81 [» ]
4KBT X-ray 3.86 S 4-82 [» ]
4KBV X-ray 3.86 S 4-82 [» ]
4KCY X-ray 3.50 S 4-82 [» ]
4KD0 X-ray 3.50 S 4-82 [» ]
4KD8 X-ray 3.50 S 4-82 [» ]
4KDA X-ray 3.50 S 4-82 [» ]
4KDG X-ray 4.00 S 4-82 [» ]
4KDJ X-ray 4.00 S 4-82 [» ]
4KFH X-ray 3.40 S 4-81 [» ]
4KFK X-ray 3.40 S 4-81 [» ]
4KVB X-ray 4.20 S 1-93 [» ]
4L6K X-ray 3.40 S 4-81 [» ]
4L6M X-ray 3.40 S 4-81 [» ]
ProteinModelPortali P62660.
SMRi P62660. Positions 2-88.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC1324.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81666 ; AAS81666 ; TT_C1324 .
GeneIDi 2775749.
KEGGi tth:TTC1324.
PATRICi 23953055. VBITheThe54392_1316.

Phylogenomic databases

eggNOGi COG0185.
KOi K02965.
OMAi ISPEFVG.
OrthoDBi EOG61S365.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1339-MONOMER.

Miscellaneous databases

EvolutionaryTracei P62660.

Family and domain databases

Gene3Di 3.30.860.10. 1 hit.
HAMAPi MF_00531. Ribosomal_S19.
InterProi IPR002222. Ribosomal_S19.
IPR005732. Ribosomal_S19_bac-type.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
[Graphical view ]
PANTHERi PTHR11880. PTHR11880. 1 hit.
Pfami PF00203. Ribosomal_S19. 1 hit.
[Graphical view ]
PIRSFi PIRSF002144. Ribosomal_S19. 1 hit.
PRINTSi PR00975. RIBOSOMALS19.
SUPFAMi SSF54570. SSF54570. 1 hit.
TIGRFAMsi TIGR01050. rpsS_bact. 1 hit.
PROSITEi PS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRS19_THET2
AccessioniPrimary (citable) accession number: P62660
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: September 3, 2014
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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