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P62659

- RS18_THET2

UniProt

P62659 - RS18_THET2

Protein

30S ribosomal protein S18

Gene

rpsR

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.By similarity

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1780-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S18
    Gene namesi
    Name:rpsR
    Synonyms:rps18
    Ordered Locus Names:TT_C1742
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 888730S ribosomal protein S18PRO_0000111249Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6 By similarity.By similarity

    Protein-protein interaction databases

    STRINGi262724.TTC1742.

    Structurei

    Secondary structure

    1
    88
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi22 – 254
    Beta strandi28 – 303
    Helixi37 – 426
    Turni43 – 475
    Helixi53 – 564
    Helixi60 – 7314
    Turni74 – 774

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2QNHX-ray3.83s1-88[»]
    3D5AX-ray3.21R1-88[»]
    3D5CX-ray3.21R1-88[»]
    3F1EX-ray3.00R1-88[»]
    3F1GX-ray3.00R1-88[»]
    3MR8X-ray3.62R19-88[»]
    3MS0X-ray3.62R19-88[»]
    3PYNX-ray3.50R19-88[»]
    3PYQX-ray3.50R19-88[»]
    3PYSX-ray3.40R19-88[»]
    3PYUX-ray3.40R19-88[»]
    4KBTX-ray3.86R19-88[»]
    4KBVX-ray3.86R19-88[»]
    4KCYX-ray3.50R19-88[»]
    4KD0X-ray3.50R19-88[»]
    4KD8X-ray3.50R19-88[»]
    4KDAX-ray3.50R19-88[»]
    4KDGX-ray4.00R19-88[»]
    4KDJX-ray4.00R19-88[»]
    4KFHX-ray3.40R19-88[»]
    4KFKX-ray3.40R19-88[»]
    4KVBX-ray4.20R1-88[»]
    4L6KX-ray3.40R19-88[»]
    4L6MX-ray3.40R19-88[»]
    ProteinModelPortaliP62659.
    SMRiP62659. Positions 8-88.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP62659.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S18P family.Curated

    Phylogenomic databases

    eggNOGiCOG0238.
    KOiK02963.
    OMAiEKEVSAC.
    OrthoDBiEOG6PCQ4R.

    Family and domain databases

    Gene3Di4.10.640.10. 1 hit.
    HAMAPiMF_00270. Ribosomal_S18.
    InterProiIPR001648. Ribosomal_S18.
    IPR018275. Ribosomal_S18_CS.
    [Graphical view]
    PANTHERiPTHR13479. PTHR13479. 1 hit.
    PfamiPF01084. Ribosomal_S18. 1 hit.
    [Graphical view]
    PRINTSiPR00974. RIBOSOMALS18.
    ProDomiPD002239. Ribosomal_S18. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF46911. SSF46911. 1 hit.
    TIGRFAMsiTIGR00165. S18. 1 hit.
    PROSITEiPS00057. RIBOSOMAL_S18. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P62659-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSTKNAKPKK EAQRRPSRKA KVKATLGEFD LRDYRNVEVL KRFLSETGKI   50
    LPRRRTGLSA KEQRILAKTI KRARILGLLP FTEKLVRK 88
    Length:88
    Mass (Da):10,231
    Last modified:January 23, 2007 - v2
    Checksum:iCFDE7AC4953EF809
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS82084.1.
    RefSeqiYP_005711.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS82084; AAS82084; TT_C1742.
    GeneIDi2775354.
    KEGGitth:TTC1742.
    PATRICi23953951. VBITheThe54392_1741.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS82084.1 .
    RefSeqi YP_005711.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2QNH X-ray 3.83 s 1-88 [» ]
    3D5A X-ray 3.21 R 1-88 [» ]
    3D5C X-ray 3.21 R 1-88 [» ]
    3F1E X-ray 3.00 R 1-88 [» ]
    3F1G X-ray 3.00 R 1-88 [» ]
    3MR8 X-ray 3.62 R 19-88 [» ]
    3MS0 X-ray 3.62 R 19-88 [» ]
    3PYN X-ray 3.50 R 19-88 [» ]
    3PYQ X-ray 3.50 R 19-88 [» ]
    3PYS X-ray 3.40 R 19-88 [» ]
    3PYU X-ray 3.40 R 19-88 [» ]
    4KBT X-ray 3.86 R 19-88 [» ]
    4KBV X-ray 3.86 R 19-88 [» ]
    4KCY X-ray 3.50 R 19-88 [» ]
    4KD0 X-ray 3.50 R 19-88 [» ]
    4KD8 X-ray 3.50 R 19-88 [» ]
    4KDA X-ray 3.50 R 19-88 [» ]
    4KDG X-ray 4.00 R 19-88 [» ]
    4KDJ X-ray 4.00 R 19-88 [» ]
    4KFH X-ray 3.40 R 19-88 [» ]
    4KFK X-ray 3.40 R 19-88 [» ]
    4KVB X-ray 4.20 R 1-88 [» ]
    4L6K X-ray 3.40 R 19-88 [» ]
    4L6M X-ray 3.40 R 19-88 [» ]
    ProteinModelPortali P62659.
    SMRi P62659. Positions 8-88.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC1742.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS82084 ; AAS82084 ; TT_C1742 .
    GeneIDi 2775354.
    KEGGi tth:TTC1742.
    PATRICi 23953951. VBITheThe54392_1741.

    Phylogenomic databases

    eggNOGi COG0238.
    KOi K02963.
    OMAi EKEVSAC.
    OrthoDBi EOG6PCQ4R.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1780-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P62659.

    Family and domain databases

    Gene3Di 4.10.640.10. 1 hit.
    HAMAPi MF_00270. Ribosomal_S18.
    InterProi IPR001648. Ribosomal_S18.
    IPR018275. Ribosomal_S18_CS.
    [Graphical view ]
    PANTHERi PTHR13479. PTHR13479. 1 hit.
    Pfami PF01084. Ribosomal_S18. 1 hit.
    [Graphical view ]
    PRINTSi PR00974. RIBOSOMALS18.
    ProDomi PD002239. Ribosomal_S18. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF46911. SSF46911. 1 hit.
    TIGRFAMsi TIGR00165. S18. 1 hit.
    PROSITEi PS00057. RIBOSOMAL_S18. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRS18_THET2
    AccessioniPrimary (citable) accession number: P62659
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 19, 2004
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 73 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3