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P62658 (RS17_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S17
Gene names
Name:rpsQ
Synonyms:rps17
Ordered Locus Names:TT_C1319
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length105 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA By similarity. HAMAP-Rule MF_01345

Subunit structure

Part of the 30S ribosomal subunit By similarity. HAMAP-Rule MF_01345

Sequence similarities

Belongs to the ribosomal protein S17P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 10510430S ribosomal protein S17 HAMAP-Rule MF_01345
PRO_0000128491

Secondary structure

.................. 105
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P62658 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 6089596D57478FBD

FASTA10512,297
        10         20         30         40         50         60 
MPKKVLTGVV VSDKMQKTVT VLVERQFPHP LYGKVIKRSK KYLAHDPEEK YKLGDVVEII 

        70         80         90        100 
ESRPISKRKR FRVLRLVESG RMDLVEKYLI RRQNYQSLSK RGGKA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS81661.1.
RefSeqYP_005288.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2OW8X-ray3.71r1-105[»]
2QNHX-ray3.83r1-105[»]
3D5AX-ray3.21Q1-105[»]
3D5CX-ray3.21Q1-105[»]
3F1EX-ray3.00Q1-105[»]
3F1GX-ray3.00Q1-105[»]
3MR8X-ray3.62Q2-100[»]
3MS0X-ray3.62Q2-100[»]
3PYNX-ray3.50Q2-100[»]
3PYQX-ray3.50Q2-100[»]
3PYSX-ray3.40Q2-100[»]
3PYUX-ray3.40Q2-100[»]
4KBTX-ray3.86Q2-101[»]
4KBVX-ray3.86Q2-101[»]
4KCYX-ray3.50Q2-101[»]
4KD0X-ray3.50Q2-101[»]
4KD8X-ray3.50Q2-101[»]
4KDAX-ray3.50Q2-101[»]
4KDGX-ray4.00Q2-101[»]
4KDJX-ray4.00Q2-101[»]
4KFHX-ray3.40Q2-100[»]
4KFKX-ray3.40Q2-100[»]
4L6KX-ray3.40Q2-100[»]
4L6MX-ray3.40Q2-100[»]
ProteinModelPortalP62658.
SMRP62658. Positions 2-105.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS81661; AAS81661; TT_C1319.
GeneID2774573.
KEGGtth:TTC1319.
PATRIC23953045. VBITheThe54392_1311.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0186.
KOK02961.
OMASKKYLAH.
OrthoDBEOG63JRH2.
ProtClustDBPRK05610.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1334-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
HAMAPMF_01345_B. Ribosomal_S17_B.
InterProIPR012340. NA-bd_OB-fold.
IPR000266. Ribosomal_S17.
IPR019984. Ribosomal_S17_bac-type.
IPR019979. Ribosomal_S17_CS.
[Graphical view]
PANTHERPTHR10744. PTHR10744. 1 hit.
PfamPF00366. Ribosomal_S17. 1 hit.
[Graphical view]
PRINTSPR00973. RIBOSOMALS17.
ProDomPD001295. Ribosomal_S17. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR03635. S17_bact. 1 hit.
PROSITEPS00056. RIBOSOMAL_S17. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP62658.

Entry information

Entry nameRS17_THET2
AccessionPrimary (citable) accession number: P62658
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: February 19, 2014
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references