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P62657

- RS15_THET2

UniProt

P62657 - RS15_THET2

Protein

30S ribosomal protein S15

Gene

rpsO

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.UniRule annotation
    Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-785-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S15UniRule annotation
    Gene namesi
    Name:rpsOUniRule annotation
    Synonyms:rps15UniRule annotation
    Ordered Locus Names:TT_C0773
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 898830S ribosomal protein S15PRO_0000115573Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.UniRule annotation

    Protein-protein interaction databases

    STRINGi262724.TTC0773.

    Structurei

    Secondary structure

    1
    89
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi5 – 1511
    Beta strandi17 – 204
    Helixi25 – 4319
    Helixi50 – 7324
    Helixi75 – 8511

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1VOQX-ray11.50O2-89[»]
    2QNHX-ray3.83p1-89[»]
    3D5AX-ray3.21O1-89[»]
    3D5CX-ray3.21O1-89[»]
    3F1EX-ray3.00O1-89[»]
    3F1GX-ray3.00O1-89[»]
    3MR8X-ray3.62O2-89[»]
    3MS0X-ray3.62O2-89[»]
    3PYNX-ray3.50O2-89[»]
    3PYQX-ray3.50O2-89[»]
    3PYSX-ray3.40O2-89[»]
    3PYUX-ray3.40O2-89[»]
    4KBTX-ray3.86O2-89[»]
    4KBVX-ray3.86O2-89[»]
    4KCYX-ray3.50O2-89[»]
    4KD0X-ray3.50O2-89[»]
    4KD8X-ray3.50O2-89[»]
    4KDAX-ray3.50O2-89[»]
    4KDGX-ray4.00O2-89[»]
    4KDJX-ray4.00O2-89[»]
    4KFHX-ray3.40O2-89[»]
    4KFKX-ray3.40O2-89[»]
    4KVBX-ray4.20O1-89[»]
    4L6KX-ray3.40O2-89[»]
    4L6MX-ray3.40O2-89[»]
    ProteinModelPortaliP62657.
    SMRiP62657. Positions 2-89.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP62657.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S15P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0184.
    KOiK02956.
    OMAiFSHRIAH.
    OrthoDBiEOG6B368J.

    Family and domain databases

    Gene3Di1.10.287.10. 1 hit.
    HAMAPiMF_01343_B. Ribosomal_S15_B.
    InterProiIPR000589. Ribosomal_S15.
    IPR005290. Ribosomal_S15_bac-type.
    IPR009068. S15_NS1_RNA-bd.
    [Graphical view]
    PfamiPF00312. Ribosomal_S15. 1 hit.
    [Graphical view]
    SUPFAMiSSF47060. SSF47060. 1 hit.
    TIGRFAMsiTIGR00952. S15_bact. 1 hit.
    PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P62657-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPITKEEKQK VIQEFARFPG DTGSTEVQVA LLTLRINRLS EHLKVHKKDH   50
    HSHRGLLMMV GQRRRLLRYL QREDPERYRA LIEKLGIRG 89
    Length:89
    Mass (Da):10,554
    Last modified:January 23, 2007 - v2
    Checksum:i9DB7E1C533DBF340
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81119.1.
    RefSeqiYP_004746.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81119; AAS81119; TT_C0773.
    GeneIDi2775245.
    KEGGitth:TTC0773.
    PATRICi23951951. VBITheThe54392_0770.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81119.1 .
    RefSeqi YP_004746.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1VOQ X-ray 11.50 O 2-89 [» ]
    2QNH X-ray 3.83 p 1-89 [» ]
    3D5A X-ray 3.21 O 1-89 [» ]
    3D5C X-ray 3.21 O 1-89 [» ]
    3F1E X-ray 3.00 O 1-89 [» ]
    3F1G X-ray 3.00 O 1-89 [» ]
    3MR8 X-ray 3.62 O 2-89 [» ]
    3MS0 X-ray 3.62 O 2-89 [» ]
    3PYN X-ray 3.50 O 2-89 [» ]
    3PYQ X-ray 3.50 O 2-89 [» ]
    3PYS X-ray 3.40 O 2-89 [» ]
    3PYU X-ray 3.40 O 2-89 [» ]
    4KBT X-ray 3.86 O 2-89 [» ]
    4KBV X-ray 3.86 O 2-89 [» ]
    4KCY X-ray 3.50 O 2-89 [» ]
    4KD0 X-ray 3.50 O 2-89 [» ]
    4KD8 X-ray 3.50 O 2-89 [» ]
    4KDA X-ray 3.50 O 2-89 [» ]
    4KDG X-ray 4.00 O 2-89 [» ]
    4KDJ X-ray 4.00 O 2-89 [» ]
    4KFH X-ray 3.40 O 2-89 [» ]
    4KFK X-ray 3.40 O 2-89 [» ]
    4KVB X-ray 4.20 O 1-89 [» ]
    4L6K X-ray 3.40 O 2-89 [» ]
    4L6M X-ray 3.40 O 2-89 [» ]
    ProteinModelPortali P62657.
    SMRi P62657. Positions 2-89.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC0773.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81119 ; AAS81119 ; TT_C0773 .
    GeneIDi 2775245.
    KEGGi tth:TTC0773.
    PATRICi 23951951. VBITheThe54392_0770.

    Phylogenomic databases

    eggNOGi COG0184.
    KOi K02956.
    OMAi FSHRIAH.
    OrthoDBi EOG6B368J.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-785-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P62657.

    Family and domain databases

    Gene3Di 1.10.287.10. 1 hit.
    HAMAPi MF_01343_B. Ribosomal_S15_B.
    InterProi IPR000589. Ribosomal_S15.
    IPR005290. Ribosomal_S15_bac-type.
    IPR009068. S15_NS1_RNA-bd.
    [Graphical view ]
    Pfami PF00312. Ribosomal_S15. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47060. SSF47060. 1 hit.
    TIGRFAMsi TIGR00952. S15_bact. 1 hit.
    PROSITEi PS00362. RIBOSOMAL_S15. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRS15_THET2
    AccessioniPrimary (citable) accession number: P62657
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 19, 2004
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 79 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3