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P62656

- RS14Z_THET2

UniProt

P62656 - RS14Z_THET2

Protein

30S ribosomal protein S14 type Z

Gene

rpsZ

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.UniRule annotation

    Cofactori

    Binds 1 zinc ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi24 – 241ZincUniRule annotation
    Metal bindingi27 – 271ZincUniRule annotation
    Metal bindingi40 – 401ZincUniRule annotation
    Metal bindingi43 – 431ZincUniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro
    3. zinc ion binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    Metal-binding, RNA-binding, rRNA-binding, Zinc

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1330-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S14 type ZUniRule annotation
    Gene namesi
    Name:rpsZUniRule annotation
    Synonyms:rps14UniRule annotation, rpsNUniRule annotation
    Ordered Locus Names:TT_C1315
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 616030S ribosomal protein S14 type ZPRO_0000130954Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.UniRule annotation

    Structurei

    Secondary structure

    1
    61
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi4 – 129
    Helixi17 – 193
    Beta strandi25 – 273
    Beta strandi30 – 345
    Turni35 – 384
    Helixi41 – 5010
    Beta strandi53 – 553
    Beta strandi56 – 583

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2QNHX-ray3.83o1-61[»]
    3D5AX-ray3.21N1-61[»]
    3D5CX-ray3.21N1-61[»]
    3F1EX-ray3.00N1-61[»]
    3F1GX-ray3.00N1-61[»]
    3MR8X-ray3.62N2-61[»]
    3MS0X-ray3.62N2-61[»]
    3PYNX-ray3.50N2-61[»]
    3PYQX-ray3.50N2-61[»]
    3PYSX-ray3.40N2-61[»]
    3PYUX-ray3.40N2-61[»]
    4KBTX-ray3.86N2-61[»]
    4KBVX-ray3.86N2-61[»]
    4KCYX-ray3.50N2-61[»]
    4KD0X-ray3.50N2-61[»]
    4KD8X-ray3.50N2-61[»]
    4KDAX-ray3.50N2-61[»]
    4KDGX-ray4.00N2-61[»]
    4KDJX-ray4.00N2-61[»]
    4KFHX-ray3.40N2-61[»]
    4KFKX-ray3.40N2-61[»]
    4KVBX-ray4.20N1-61[»]
    4L6KX-ray3.40N2-61[»]
    4L6MX-ray3.40N2-61[»]
    ProteinModelPortaliP62656.
    SMRiP62656. Positions 2-61.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP62656.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S14P family. Zinc-binding S14P subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0199.
    KOiK02954.
    OMAiKHPKFST.
    OrthoDBiEOG6BCT0K.

    Family and domain databases

    HAMAPiMF_01364_B. Ribosomal_S14_2_B.
    InterProiIPR001209. Ribosomal_S14.
    IPR018271. Ribosomal_S14_CS.
    IPR023053. Ribosomal_S14_Z.
    [Graphical view]
    PANTHERiPTHR19836. PTHR19836. 1 hit.
    PfamiPF00253. Ribosomal_S14. 1 hit.
    [Graphical view]
    PROSITEiPS00527. RIBOSOMAL_S14. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P62656-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARKALIEKA KRTPKFKVRA YTRCVRCGRA RSVYRFFGLC RICLRELAHK   50
    GQLPGVRKAS W 61
    Length:61
    Mass (Da):7,140
    Last modified:January 23, 2007 - v2
    Checksum:iBEE8AB1E1E86B531
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81657.1.
    RefSeqiYP_005284.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81657; AAS81657; TT_C1315.
    GeneIDi2774976.
    KEGGitth:TTC1315.
    PATRICi23953037. VBITheThe54392_1307.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81657.1 .
    RefSeqi YP_005284.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2QNH X-ray 3.83 o 1-61 [» ]
    3D5A X-ray 3.21 N 1-61 [» ]
    3D5C X-ray 3.21 N 1-61 [» ]
    3F1E X-ray 3.00 N 1-61 [» ]
    3F1G X-ray 3.00 N 1-61 [» ]
    3MR8 X-ray 3.62 N 2-61 [» ]
    3MS0 X-ray 3.62 N 2-61 [» ]
    3PYN X-ray 3.50 N 2-61 [» ]
    3PYQ X-ray 3.50 N 2-61 [» ]
    3PYS X-ray 3.40 N 2-61 [» ]
    3PYU X-ray 3.40 N 2-61 [» ]
    4KBT X-ray 3.86 N 2-61 [» ]
    4KBV X-ray 3.86 N 2-61 [» ]
    4KCY X-ray 3.50 N 2-61 [» ]
    4KD0 X-ray 3.50 N 2-61 [» ]
    4KD8 X-ray 3.50 N 2-61 [» ]
    4KDA X-ray 3.50 N 2-61 [» ]
    4KDG X-ray 4.00 N 2-61 [» ]
    4KDJ X-ray 4.00 N 2-61 [» ]
    4KFH X-ray 3.40 N 2-61 [» ]
    4KFK X-ray 3.40 N 2-61 [» ]
    4KVB X-ray 4.20 N 1-61 [» ]
    4L6K X-ray 3.40 N 2-61 [» ]
    4L6M X-ray 3.40 N 2-61 [» ]
    ProteinModelPortali P62656.
    SMRi P62656. Positions 2-61.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81657 ; AAS81657 ; TT_C1315 .
    GeneIDi 2774976.
    KEGGi tth:TTC1315.
    PATRICi 23953037. VBITheThe54392_1307.

    Phylogenomic databases

    eggNOGi COG0199.
    KOi K02954.
    OMAi KHPKFST.
    OrthoDBi EOG6BCT0K.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1330-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P62656.

    Family and domain databases

    HAMAPi MF_01364_B. Ribosomal_S14_2_B.
    InterProi IPR001209. Ribosomal_S14.
    IPR018271. Ribosomal_S14_CS.
    IPR023053. Ribosomal_S14_Z.
    [Graphical view ]
    PANTHERi PTHR19836. PTHR19836. 1 hit.
    Pfami PF00253. Ribosomal_S14. 1 hit.
    [Graphical view ]
    PROSITEi PS00527. RIBOSOMAL_S14. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRS14Z_THET2
    AccessioniPrimary (citable) accession number: P62656
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 19, 2004
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 73 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3