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P62656

- RS14Z_THET2

UniProt

P62656 - RS14Z_THET2

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Protein
30S ribosomal protein S14 type Z
Gene
rpsZ, rps14, rpsN, TT_C1315
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site By similarity.UniRule annotation

Cofactori

Binds 1 zinc ion per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi24 – 241Zinc By similarity
Metal bindingi27 – 271Zinc By similarity
Metal bindingi40 – 401Zinc By similarity
Metal bindingi43 – 431Zinc By similarity

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
  3. zinc ion binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

Metal-binding, RNA-binding, rRNA-binding, Zinc

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1330-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S14 type Z
Gene namesi
Name:rpsZ
Synonyms:rps14, rpsN
Ordered Locus Names:TT_C1315
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 616030S ribosomal protein S14 type ZUniRule annotation
PRO_0000130954Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S3 and S10 By similarity.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi4 – 129
Helixi17 – 193
Beta strandi25 – 273
Beta strandi30 – 345
Turni35 – 384
Helixi41 – 5010
Beta strandi53 – 553
Beta strandi56 – 583

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2QNHX-ray3.83o1-61[»]
3D5AX-ray3.21N1-61[»]
3D5CX-ray3.21N1-61[»]
3F1EX-ray3.00N1-61[»]
3F1GX-ray3.00N1-61[»]
3MR8X-ray3.62N2-61[»]
3MS0X-ray3.62N2-61[»]
3PYNX-ray3.50N2-61[»]
3PYQX-ray3.50N2-61[»]
3PYSX-ray3.40N2-61[»]
3PYUX-ray3.40N2-61[»]
4KBTX-ray3.86N2-61[»]
4KBVX-ray3.86N2-61[»]
4KCYX-ray3.50N2-61[»]
4KD0X-ray3.50N2-61[»]
4KD8X-ray3.50N2-61[»]
4KDAX-ray3.50N2-61[»]
4KDGX-ray4.00N2-61[»]
4KDJX-ray4.00N2-61[»]
4KFHX-ray3.40N2-61[»]
4KFKX-ray3.40N2-61[»]
4KVBX-ray4.20N1-61[»]
4L6KX-ray3.40N2-61[»]
4L6MX-ray3.40N2-61[»]
ProteinModelPortaliP62656.
SMRiP62656. Positions 2-61.

Miscellaneous databases

EvolutionaryTraceiP62656.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0199.
KOiK02954.
OMAiKHPKFST.
OrthoDBiEOG6BCT0K.

Family and domain databases

HAMAPiMF_01364_B. Ribosomal_S14_2_B.
InterProiIPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
IPR023053. Ribosomal_S14_Z.
[Graphical view]
PANTHERiPTHR19836. PTHR19836. 1 hit.
PfamiPF00253. Ribosomal_S14. 1 hit.
[Graphical view]
PROSITEiPS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62656-1 [UniParc]FASTAAdd to Basket

« Hide

MARKALIEKA KRTPKFKVRA YTRCVRCGRA RSVYRFFGLC RICLRELAHK   50
GQLPGVRKAS W 61
Length:61
Mass (Da):7,140
Last modified:January 23, 2007 - v2
Checksum:iBEE8AB1E1E86B531
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81657.1.
RefSeqiYP_005284.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81657; AAS81657; TT_C1315.
GeneIDi2774976.
KEGGitth:TTC1315.
PATRICi23953037. VBITheThe54392_1307.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81657.1 .
RefSeqi YP_005284.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2QNH X-ray 3.83 o 1-61 [» ]
3D5A X-ray 3.21 N 1-61 [» ]
3D5C X-ray 3.21 N 1-61 [» ]
3F1E X-ray 3.00 N 1-61 [» ]
3F1G X-ray 3.00 N 1-61 [» ]
3MR8 X-ray 3.62 N 2-61 [» ]
3MS0 X-ray 3.62 N 2-61 [» ]
3PYN X-ray 3.50 N 2-61 [» ]
3PYQ X-ray 3.50 N 2-61 [» ]
3PYS X-ray 3.40 N 2-61 [» ]
3PYU X-ray 3.40 N 2-61 [» ]
4KBT X-ray 3.86 N 2-61 [» ]
4KBV X-ray 3.86 N 2-61 [» ]
4KCY X-ray 3.50 N 2-61 [» ]
4KD0 X-ray 3.50 N 2-61 [» ]
4KD8 X-ray 3.50 N 2-61 [» ]
4KDA X-ray 3.50 N 2-61 [» ]
4KDG X-ray 4.00 N 2-61 [» ]
4KDJ X-ray 4.00 N 2-61 [» ]
4KFH X-ray 3.40 N 2-61 [» ]
4KFK X-ray 3.40 N 2-61 [» ]
4KVB X-ray 4.20 N 1-61 [» ]
4L6K X-ray 3.40 N 2-61 [» ]
4L6M X-ray 3.40 N 2-61 [» ]
ProteinModelPortali P62656.
SMRi P62656. Positions 2-61.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81657 ; AAS81657 ; TT_C1315 .
GeneIDi 2774976.
KEGGi tth:TTC1315.
PATRICi 23953037. VBITheThe54392_1307.

Phylogenomic databases

eggNOGi COG0199.
KOi K02954.
OMAi KHPKFST.
OrthoDBi EOG6BCT0K.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1330-MONOMER.

Miscellaneous databases

EvolutionaryTracei P62656.

Family and domain databases

HAMAPi MF_01364_B. Ribosomal_S14_2_B.
InterProi IPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
IPR023053. Ribosomal_S14_Z.
[Graphical view ]
PANTHERi PTHR19836. PTHR19836. 1 hit.
Pfami PF00253. Ribosomal_S14. 1 hit.
[Graphical view ]
PROSITEi PS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRS14Z_THET2
AccessioniPrimary (citable) accession number: P62656
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: September 3, 2014
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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