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P62654 (RS11_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S11
Gene names
Name:rpsK
Synonyms:rps11
Ordered Locus Names:TT_C1302
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length129 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Located on the upper part of the platform of the 30S subunit, where it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome By similarity. HAMAP-Rule MF_01310

Subunit structure

Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to the C-terminus of IF-3; however exactly how IF-3 interacts with the 30S subunit is unclear.

Sequence similarities

Belongs to the ribosomal protein S11P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 12912830S ribosomal protein S11 HAMAP-Rule MF_01310
PRO_0000123245

Secondary structure

...................... 129
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P62654 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 028E047E6DCE3CA2

FASTA12913,713
        10         20         30         40         50         60 
MAKKPSKKKV KRQVASGRAY IHASYNNTIV TITDPDGNPI TWSSGGVIGY KGSRKGTPYA 

        70         80         90        100        110        120 
AQLAALDAAK KAMAYGMQSV DVIVRGTGAG REQAIRALQA SGLQVKSIVD DTPVPHNGCR 


PKKKFRKAS 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS81644.1.
RefSeqYP_005271.1. NC_005835.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2QNHX-ray3.83l1-129[»]
3D5AX-ray3.21K1-129[»]
3D5CX-ray3.21K1-129[»]
3F1EX-ray3.00K1-129[»]
3F1GX-ray3.00K1-129[»]
3MR8X-ray3.62K11-129[»]
3MS0X-ray3.62K11-129[»]
3PYNX-ray3.50K11-129[»]
3PYQX-ray3.50K11-129[»]
3PYSX-ray3.40K11-129[»]
3PYUX-ray3.40K11-129[»]
4KBTX-ray3.86K11-129[»]
4KBVX-ray3.86K11-129[»]
4KCYX-ray3.50K11-129[»]
4KD0X-ray3.50K11-129[»]
4KD8X-ray3.50K11-129[»]
4KDAX-ray3.50K11-129[»]
4KDGX-ray4.00K11-129[»]
4KDJX-ray4.00K11-129[»]
4KFHX-ray3.40K11-124[»]
4KFKX-ray3.40K11-124[»]
4L6KX-ray3.40K11-124[»]
4L6MX-ray3.40K11-124[»]
ProteinModelPortalP62654.
SMRP62654. Positions 7-129.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC1302.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS81644; AAS81644; TT_C1302.
GeneID2774735.
KEGGtth:TTC1302.
PATRIC23953011. VBITheThe54392_1294.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0100.
KOK02948.
OMAPYASQIT.
OrthoDBEOG6ZSPF3.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1317-MONOMER.

Family and domain databases

Gene3D3.30.420.80. 1 hit.
HAMAPMF_01310. Ribosomal_S11.
InterProIPR001971. Ribosomal_S11.
IPR019981. Ribosomal_S11_bac-type.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERPTHR11759. PTHR11759. 1 hit.
PfamPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFPIRSF002131. Ribosomal_S11. 1 hit.
TIGRFAMsTIGR03632. bact_S11. 1 hit.
PROSITEPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP62654.

Entry information

Entry nameRS11_THET2
AccessionPrimary (citable) accession number: P62654
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: May 14, 2014
This is version 70 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references