50S ribosomal protein L32 - Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)

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P62652 (RL32_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 60. History...

Clusters with 100%, 90%, 50% identity |

Documents (3) |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
50S ribosomal protein L32

Gene names

Name:	rpmF
Synonyms:	rpl32
Ordered Locus Names:	TT_C0050

Organism

Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus ›

Protein attributes

Sequence length	60 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Found on the solvent side of the large subunit By similarity. HAMAP-Rule MF_00340
Subunit structure	Part of the 50S ribosomal subunit.
Sequence similarities	Belongs to the ribosomal protein L32P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	3D-structure Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Initiator methionine

1

Removed By similarity

Chain

59

50S ribosomal protein L32 HAMAP-Rule MF_00340

PRO_0000172426

Secondary structure

1

.

.

.

.

.

.

.

.

60

Helix Strand Turn

Sequences

Sequence

Length

Mass (Da)

Tools

P62652 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 9599DCB90FF2DE45
Show »

60

6,717

        10         20         30         40         50         60 
MAKHPVPKKK TSKARRDARR SHHALTPPIL VPCPECKAMK PPHTVCPECG YYAGRKVLEV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Fusion with ribosomal protein L32 increased the in vivo thermostability of kanamycin nucleotidyltransferase in Thermus thermophilus." Maseda H., Hoshino T. J. Ferment. Bioeng. 82:525-530(1996) Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"The genome sequence of the extreme thermophile Thermus thermophilus." Henne A., Brueggemann H., Raasch C., Wiezer A., Hartsch T., Liesegang H., Johann A., Lienard T., Gohl O., Martinez-Arias R., Jacobi C., Starkuviene V., Schlenczeck S., Dencker S., Huber R., Klenk H.-P., Kramer W., Merkl R., Gottschalk G., Fritz H.-J. Nat. Biotechnol. 22:547-553(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HB27 / ATCC BAA-163 / DSM 7039.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AB002823 Genomic DNA. Translation: BAA19663.1.
AE017221 Genomic DNA. Translation: AAS80398.1.

PIR

RefSeq

YP_004025.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1TWV	model	-	P	1-60	[»]
1VSA	X-ray	3.71	Y	1-60	[»]
1VSP	X-ray	3.83	Y	1-60	[»]
3D5B	X-ray	3.21	5	1-60	[»]
3D5D	X-ray	3.21	5	1-60	[»]
3F1F	X-ray	3.00	5	1-60	[»]
3F1H	X-ray	3.00	5	1-60	[»]
3MRZ	X-ray	3.62	2	2-60	[»]
3MS1	X-ray	3.62	2	2-60	[»]
3PYO	X-ray	3.50	2	2-53	[»]
3PYR	X-ray	3.50	2	2-53	[»]
3PYT	X-ray	3.40	2	2-53	[»]
3PYV	X-ray	3.40	2	2-53	[»]

ProteinModelPortal

SMR

P62652. Positions 5-60.

ModBase

Protein-protein interaction databases

STRING

262724.TTC0050.

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

AAS80398; AAS80398; TT_C0050.

GeneID

KEGG

PATRIC

23950483. VBITheThe54392_0050.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

KO

OMA

ProtClustDB

Family and domain databases

HAMAP

MF_00340. Ribosomal_L32.

InterPro

IPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd_dom.
[Graphical view]

Pfam

PF01783. Ribosomal_L32p. 1 hit.
[Graphical view]

SUPFAM

SSF57829. Ribosomal_zn-bd. 1 hit.

TIGRFAMs

TIGR01031. rpmF_bact. 1 hit.

ProtoNet

Other

EvolutionaryTrace

Entry information

Entry name

RL32_THET2

Accession

Primary (citable) accession number: P62652

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 19, 2004
Last sequence update:	January 23, 2007
Last modified:	May 1, 2013
This is version 60 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents