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P62652

- RL32_THET2

UniProt

P62652 - RL32_THET2

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Protein

50S ribosomal protein L32

Gene
rpmF, rpl32, TT_C0050
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Found on the solvent side of the large subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-50-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L32
Gene namesi
Name:rpmF
Synonyms:rpl32
Ordered Locus Names:TT_C0050
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 605950S ribosomal protein L32UniRule annotationPRO_0000172426Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Protein-protein interaction databases

STRINGi262724.TTC0050.

Structurei

Secondary structure

1
60
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi13 – 197
Helixi20 – 223
Beta strandi34 – 407
Turni47 – 493
Beta strandi51 – 533

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TWVmodel-P1-60[»]
1VSAX-ray3.71Y1-60[»]
1VSPX-ray3.83Y1-60[»]
3D5BX-ray3.2151-60[»]
3D5DX-ray3.2151-60[»]
3F1FX-ray3.0051-60[»]
3F1HX-ray3.0051-60[»]
3MRZX-ray3.6222-60[»]
3MS1X-ray3.6222-60[»]
3PYOX-ray3.5022-53[»]
3PYRX-ray3.5022-53[»]
3PYTX-ray3.4022-53[»]
3PYVX-ray3.4022-53[»]
4KBUX-ray3.8652-60[»]
4KBWX-ray3.8652-60[»]
4KCZX-ray3.5052-60[»]
4KD2X-ray3.5052-60[»]
4KD9X-ray3.5052-60[»]
4KDBX-ray3.5052-60[»]
4KDHX-ray4.0052-60[»]
4KDKX-ray4.0052-60[»]
4KFIX-ray3.4052-53[»]
4KFLX-ray3.4052-53[»]
4L6JX-ray3.4022-53[»]
4L6LX-ray3.4022-53[»]
ProteinModelPortaliP62652.
SMRiP62652. Positions 5-60.

Miscellaneous databases

EvolutionaryTraceiP62652.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0333.
KOiK02911.
OMAiVESCPRA.
OrthoDBiEOG6VMTT4.

Family and domain databases

HAMAPiMF_00340. Ribosomal_L32.
InterProiIPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01783. Ribosomal_L32p. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR01031. rpmF_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62652-1 [UniParc]FASTAAdd to Basket

« Hide

MAKHPVPKKK TSKARRDARR SHHALTPPIL VPCPECKAMK PPHTVCPECG   50
YYAGRKVLEV 60
Length:60
Mass (Da):6,717
Last modified:January 23, 2007 - v2
Checksum:i9599DCB90FF2DE45
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB002823 Genomic DNA. Translation: BAA19663.1.
AE017221 Genomic DNA. Translation: AAS80398.1.
PIRiT11853.
RefSeqiYP_004025.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS80398; AAS80398; TT_C0050.
GeneIDi2776410.
KEGGitth:TTC0050.
PATRICi23950483. VBITheThe54392_0050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB002823 Genomic DNA. Translation: BAA19663.1 .
AE017221 Genomic DNA. Translation: AAS80398.1 .
PIRi T11853.
RefSeqi YP_004025.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1TWV model - P 1-60 [» ]
1VSA X-ray 3.71 Y 1-60 [» ]
1VSP X-ray 3.83 Y 1-60 [» ]
3D5B X-ray 3.21 5 1-60 [» ]
3D5D X-ray 3.21 5 1-60 [» ]
3F1F X-ray 3.00 5 1-60 [» ]
3F1H X-ray 3.00 5 1-60 [» ]
3MRZ X-ray 3.62 2 2-60 [» ]
3MS1 X-ray 3.62 2 2-60 [» ]
3PYO X-ray 3.50 2 2-53 [» ]
3PYR X-ray 3.50 2 2-53 [» ]
3PYT X-ray 3.40 2 2-53 [» ]
3PYV X-ray 3.40 2 2-53 [» ]
4KBU X-ray 3.86 5 2-60 [» ]
4KBW X-ray 3.86 5 2-60 [» ]
4KCZ X-ray 3.50 5 2-60 [» ]
4KD2 X-ray 3.50 5 2-60 [» ]
4KD9 X-ray 3.50 5 2-60 [» ]
4KDB X-ray 3.50 5 2-60 [» ]
4KDH X-ray 4.00 5 2-60 [» ]
4KDK X-ray 4.00 5 2-60 [» ]
4KFI X-ray 3.40 5 2-53 [» ]
4KFL X-ray 3.40 5 2-53 [» ]
4L6J X-ray 3.40 2 2-53 [» ]
4L6L X-ray 3.40 2 2-53 [» ]
ProteinModelPortali P62652.
SMRi P62652. Positions 5-60.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC0050.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS80398 ; AAS80398 ; TT_C0050 .
GeneIDi 2776410.
KEGGi tth:TTC0050.
PATRICi 23950483. VBITheThe54392_0050.

Phylogenomic databases

eggNOGi COG0333.
KOi K02911.
OMAi VESCPRA.
OrthoDBi EOG6VMTT4.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-50-MONOMER.

Miscellaneous databases

EvolutionaryTracei P62652.

Family and domain databases

HAMAPi MF_00340. Ribosomal_L32.
InterProi IPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd.
[Graphical view ]
Pfami PF01783. Ribosomal_L32p. 1 hit.
[Graphical view ]
SUPFAMi SSF57829. SSF57829. 1 hit.
TIGRFAMsi TIGR01031. rpmF_bact. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Fusion with ribosomal protein L32 increased the in vivo thermostability of kanamycin nucleotidyltransferase in Thermus thermophilus."
    Maseda H., Hoshino T.
    J. Ferment. Bioeng. 82:525-530(1996)
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL32_THET2
AccessioniPrimary (citable) accession number: P62652
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: May 14, 2014
This is version 65 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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