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P62652

- RL32_THET2

UniProt

P62652 - RL32_THET2

Protein

50S ribosomal protein L32

Gene

rpmF

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Found on the solvent side of the large subunit.By similarity

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-50-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L32
    Gene namesi
    Name:rpmF
    Synonyms:rpl32
    Ordered Locus Names:TT_C0050
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 605950S ribosomal protein L32PRO_0000172426Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.

    Protein-protein interaction databases

    STRINGi262724.TTC0050.

    Structurei

    Secondary structure

    1
    60
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi13 – 197
    Helixi20 – 223
    Beta strandi34 – 407
    Turni47 – 493
    Beta strandi51 – 533

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1TWVmodel-P1-60[»]
    1VSAX-ray3.71Y1-60[»]
    1VSPX-ray3.83Y1-60[»]
    3D5BX-ray3.2151-60[»]
    3D5DX-ray3.2151-60[»]
    3F1FX-ray3.0051-60[»]
    3F1HX-ray3.0051-60[»]
    3MRZX-ray3.6222-60[»]
    3MS1X-ray3.6222-60[»]
    3PYOX-ray3.5022-53[»]
    3PYRX-ray3.5022-53[»]
    3PYTX-ray3.4022-53[»]
    3PYVX-ray3.4022-53[»]
    4KBUX-ray3.8652-60[»]
    4KBWX-ray3.8652-60[»]
    4KCZX-ray3.5052-60[»]
    4KD2X-ray3.5052-60[»]
    4KD9X-ray3.5052-60[»]
    4KDBX-ray3.5052-60[»]
    4KDHX-ray4.0052-60[»]
    4KDKX-ray4.0052-60[»]
    4KFIX-ray3.4052-53[»]
    4KFLX-ray3.4052-53[»]
    4L6JX-ray3.4022-53[»]
    4L6LX-ray3.4022-53[»]
    ProteinModelPortaliP62652.
    SMRiP62652. Positions 5-60.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP62652.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L32P family.Curated

    Phylogenomic databases

    eggNOGiCOG0333.
    KOiK02911.
    OMAiVESCPRA.
    OrthoDBiEOG6VMTT4.

    Family and domain databases

    HAMAPiMF_00340. Ribosomal_L32.
    InterProiIPR002677. Ribosomal_L32p.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view]
    PfamiPF01783. Ribosomal_L32p. 1 hit.
    [Graphical view]
    SUPFAMiSSF57829. SSF57829. 1 hit.
    TIGRFAMsiTIGR01031. rpmF_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P62652-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKHPVPKKK TSKARRDARR SHHALTPPIL VPCPECKAMK PPHTVCPECG   50
    YYAGRKVLEV 60
    Length:60
    Mass (Da):6,717
    Last modified:January 23, 2007 - v2
    Checksum:i9599DCB90FF2DE45
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB002823 Genomic DNA. Translation: BAA19663.1.
    AE017221 Genomic DNA. Translation: AAS80398.1.
    PIRiT11853.
    RefSeqiYP_004025.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS80398; AAS80398; TT_C0050.
    GeneIDi2776410.
    KEGGitth:TTC0050.
    PATRICi23950483. VBITheThe54392_0050.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB002823 Genomic DNA. Translation: BAA19663.1 .
    AE017221 Genomic DNA. Translation: AAS80398.1 .
    PIRi T11853.
    RefSeqi YP_004025.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1TWV model - P 1-60 [» ]
    1VSA X-ray 3.71 Y 1-60 [» ]
    1VSP X-ray 3.83 Y 1-60 [» ]
    3D5B X-ray 3.21 5 1-60 [» ]
    3D5D X-ray 3.21 5 1-60 [» ]
    3F1F X-ray 3.00 5 1-60 [» ]
    3F1H X-ray 3.00 5 1-60 [» ]
    3MRZ X-ray 3.62 2 2-60 [» ]
    3MS1 X-ray 3.62 2 2-60 [» ]
    3PYO X-ray 3.50 2 2-53 [» ]
    3PYR X-ray 3.50 2 2-53 [» ]
    3PYT X-ray 3.40 2 2-53 [» ]
    3PYV X-ray 3.40 2 2-53 [» ]
    4KBU X-ray 3.86 5 2-60 [» ]
    4KBW X-ray 3.86 5 2-60 [» ]
    4KCZ X-ray 3.50 5 2-60 [» ]
    4KD2 X-ray 3.50 5 2-60 [» ]
    4KD9 X-ray 3.50 5 2-60 [» ]
    4KDB X-ray 3.50 5 2-60 [» ]
    4KDH X-ray 4.00 5 2-60 [» ]
    4KDK X-ray 4.00 5 2-60 [» ]
    4KFI X-ray 3.40 5 2-53 [» ]
    4KFL X-ray 3.40 5 2-53 [» ]
    4L6J X-ray 3.40 2 2-53 [» ]
    4L6L X-ray 3.40 2 2-53 [» ]
    ProteinModelPortali P62652.
    SMRi P62652. Positions 5-60.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC0050.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS80398 ; AAS80398 ; TT_C0050 .
    GeneIDi 2776410.
    KEGGi tth:TTC0050.
    PATRICi 23950483. VBITheThe54392_0050.

    Phylogenomic databases

    eggNOGi COG0333.
    KOi K02911.
    OMAi VESCPRA.
    OrthoDBi EOG6VMTT4.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-50-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P62652.

    Family and domain databases

    HAMAPi MF_00340. Ribosomal_L32.
    InterProi IPR002677. Ribosomal_L32p.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view ]
    Pfami PF01783. Ribosomal_L32p. 1 hit.
    [Graphical view ]
    SUPFAMi SSF57829. SSF57829. 1 hit.
    TIGRFAMsi TIGR01031. rpmF_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Fusion with ribosomal protein L32 increased the in vivo thermostability of kanamycin nucleotidyltransferase in Thermus thermophilus."
      Maseda H., Hoshino T.
      J. Ferment. Bioeng. 82:525-530(1996)
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL32_THET2
    AccessioniPrimary (citable) accession number: P62652
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 19, 2004
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 66 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3