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Protein

30S ribosomal protein Thx

Gene

rpsU

Organism
Thermus thermophilus
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Binds at the top of the head of the 30S subunit. It stabilizes a number of different RNA elements and thus is important for subunit structure (By similarity).By similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein Thx
Gene namesi
Name:rpsU
OrganismiThermus thermophilus
Taxonomic identifieri274 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemoved2 Publications
Chaini2 – 272630S ribosomal protein ThxPRO_0000217200Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.

Structurei

Secondary structure

1
27
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi9 – 157Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TWTmodel-X2-27[»]
4V8XX-ray3.35AU/CU1-27[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S31e family.Curated

Family and domain databases

InterProiIPR030826. Ribo_THX.
IPR031414. Thx.
[Graphical view]
PfamiPF17070. Thx. 1 hit.
[Graphical view]
TIGRFAMsiTIGR04560. ribo_THX. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62612-1 [UniParc]FASTAAdd to basket

« Hide

        10         20 
MGKGDRRTRR GKIWRGTYGK YRPRKKK
Length:27
Mass (Da):3,337
Last modified:January 23, 2007 - v2
Checksum:i85822DC5D8D8C604
GO

Sequence databases

PIRiS33869.

Cross-referencesi

Sequence databases

PIRiS33869.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TWTmodel-X2-27[»]
4V8XX-ray3.35AU/CU1-27[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR030826. Ribo_THX.
IPR031414. Thx.
[Graphical view]
PfamiPF17070. Thx. 1 hit.
[Graphical view]
TIGRFAMsiTIGR04560. ribo_THX. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRSHX_THETH
AccessioniPrimary (citable) accession number: P62612
Secondary accession number(s): P32193, P80383, Q9F2A8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: November 11, 2015
This is version 36 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.